Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0962 ATGGTTAATGTGATGAACACTAATTCAAGTAATGCAGAACGAACAACTGTGCGCATGCTAGAAAGCTTGATACGGTTAGCCCAAGCACATGCAGGACTGATGTTCAGAAATGAGGTCACCAGACTAGATGCCATCACAGCCATTCTCTGCATTGAATCATCCATGACCACCTCAACCATTGTGGACAATGTCGAGAATGCCCTACACTCCAATTTCACTGAGAATCCTGATCAGGAATGTATCCTCACAATCTGTGTCCATAGTTAA 267 0.4345 MVNVMNTNSSNAERTTVRMLESLIRLAQAHAGLMFRNEVTRLDAITAILCIESSMTTSTIVDNVENALHSNFTENPDQECILTICVHS* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0962 88 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 9 67 IPR031327 GO:0003677|GO:0005524|GO:0032508
Vvi2g0962 88 Gene3D - 2 60 IPR027417 -
Vvi2g0962 88 Pfam MCM AAA-lid domain 8 55 IPR041562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0962 Vvi-Chr2 13681703 13682046 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0962 7 82 Core DNA Replication Machinery Family AT2G14050 82.895 2.64e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0962 K10738 - thj:104819509 128.257