Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0944 ATGGCCATGCATAACCATGTCATATTCATTTCACCTTATACCCAGGTCTCATACCCCATGCAAACATACCCATTTCTTCACTACCTTTCTCTCTCTACACCGTCACCCCAAACCCACTCAAACTCATCACCACTCACGCTCATGCGTTCACTCCGCACACTCACATCTTCACTCTTAAATTCATGTCTCATACCTACTGCCCACATATCCATCACATTACCTCCATTCATTACACCCACCCATCAAACCCATTCCACATATGCCGCTGCAACCACCATTGCCTCCACATCCAATCCTTCCATCCATGCCAGCTTTCCAACACCTATACTCCACAAATCAGCACCTCAGGTGGCATTATTTTCTGCTCGGGGACCCAATATAAGAGATTTCAACTTCCAAGATGCGGATCTTCTCAAACTAGATATTCTAGCTCCAGGTTCTCTCATTTGGGCTGCCTGGTCTCCAAATGGAACGGATGTGGCCAATTATGTTGGAGAAGGGTTTGCAATGGTCTCCGGAACTAGCATGGTTGCACCACATATAGCTGGAATATCTGCCCTACAGAAGGACTGTCATTGGGATTAA 585 0.4632 MAMHNHVIFISPYTQVSYPMQTYPFLHYLSLSTPSPQTHSNSSPLTLMRSLRTLTSSLLNSCLIPTAHISITLPPFITPTHQTHSTYAAATTIASTSNPSIHASFPTPILHKSAPQVALFSARGPNIRDFNFQDADLLKLDILAPGSLIWAAWSPNGTDVANYVGEGFAMVSGTSMVAPHIAGISALQKDCHWD* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0944 194 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 83 192 IPR045051 -
Vvi2g0944 194 Pfam Subtilase family 82 189 IPR000209 GO:0006508|GO:0008236
Vvi2g0944 194 SUPERFAMILY Subtilisin-like 82 194 IPR036852 GO:0004252|GO:0006508
Vvi2g0944 194 Gene3D - 82 110 - -
Vvi2g0944 194 ProSiteProfiles Serine proteases, subtilase domain profile. 1 194 - -
Vvi2g0944 194 Gene3D Peptidase S8/S53 domain 111 192 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0944 Vvi-Chr2 13170779 13171363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0944 108 192 Subtilisin-like Serine Gene Family AT4G30020 81.176 1.23e-42 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0944 - - vri:117925010 162.54