Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0935 ATGGAACTTCAAATCGCCTTGCTCCTGCTTTGCATCACACTCTTCTGTTTCTGCCTCCGCCACTTTCTCTTGCCATCATACACTGCAAAGCTACCACCCGGTCCAACTGGCCTTCCCATCTTGGGCTCACTGCTTCAACTCGGTGAAAAACCCCACCACACACTTGCAAAATTCGCTGAATCCCACGGCCCTCTCATCTCTCTCCGCCTCGGCTCCATCACCACCGTGGTCGCTTCCTCCCCTCAAACAGCCAAACTAATCCTCCAAAACCATGCTGACAACTTCTTGGATCGTCCTGTTCCTGATGCTATCATGGCAATGCCTAATCCTGAATGCACACTTGCTTGGATCCCTGGTGACCATGTGTGGCGCAACCGCCGCAGAGTTTGCGCTTCTCACATGTTCACTACTCAGAGACTCGACTCACTCCAACACCTGCGGCAGAAAAAAGTGGACCAACTCCTCCAACACATCACAAAACACTGTGTTTTGGGAACACCGGTATACATTACCGATCTCGCCTCAGCCACCATCTTGAACTTGATGTCAAACACCATGTTCTCCGTTGACCTTGTTGATCCAAGATTCGAGTCAGCTCAGGAGTTCAGGGAGCTGATGTGGAGAATTATGGAGGGTGTTGGGAAGCCCAACATTTCAGATTATTTTCCCATATTCCGGAGTTTGGACTTGCAAGGTGTGAAGCGTGGCACCGTTCCATCCTACAAAAGACTCCATGAGATACTTGATGGGATCATCCAAGAACGCATGAAACTTAGAGCCTCCAGTTCCACCACCAGCATGAATGATTTCTTGGATGTGCTTCTTGATCAGTGCCAAGTGGATGGCTCTGATTTCAGTTCTGATACTATCAAGACTTTACTTGTGGAACTAGTCTTTGGTGGAAGTGATACTTCTTCAGTAACAATCGAGTGGGCAATGGCTGAACTTCTTCGCAATCCTCATGTGATGCAAAAGGTTCGAATAGAGCTGAGTGAGGTAATCAGCCCAGGGCAAAGTATAAAAGAATCAGATATTGATCGACTGCCATATTTTCAAGCGGTTGTAAAAGAGACAATGAGACTCCATCCGCCTGCTCCTCTTCTCTTACCATATAAGGCAAAGAATGACCTAGAAATATGTGGTTTCACCATACCGAAGGACAGTCATGTTCTAGTGAATATTTGGGCTATTGCAAGAGATCCAGGATACTGGGAGGATCCATTGTCATTCCTTCCTGAAAGATTCTTGAGTTCTAACATAGATTTTAGAGGTCAAGATTTTGAATACCTACCATTTGGAGCAGGTAAGCGAATCTGCCCAGGCATATCCCTTGGTCTAAGAATGGTTCATTTAGTACTAGCTTCCATTATTCATTCGTTCAGTTGGAAGCTTCCTCAGGGAATCACTCCGGAGAGCCTCGACATGAAGGAGCAGTTTGGAGTTACCCTGAAAAAGGTCGTTCCCCTTTGCGCCATTCCATTCATAGAAGAAAAATGCTCTCCATAA 1506 0.4655 MELQIALLLLCITLFCFCLRHFLLPSYTAKLPPGPTGLPILGSLLQLGEKPHHTLAKFAESHGPLISLRLGSITTVVASSPQTAKLILQNHADNFLDRPVPDAIMAMPNPECTLAWIPGDHVWRNRRRVCASHMFTTQRLDSLQHLRQKKVDQLLQHITKHCVLGTPVYITDLASATILNLMSNTMFSVDLVDPRFESAQEFRELMWRIMEGVGKPNISDYFPIFRSLDLQGVKRGTVPSYKRLHEILDGIIQERMKLRASSSTTSMNDFLDVLLDQCQVDGSDFSSDTIKTLLVELVFGGSDTSSVTIEWAMAELLRNPHVMQKVRIELSEVISPGQSIKESDIDRLPYFQAVVKETMRLHPPAPLLLPYKAKNDLEICGFTIPKDSHVLVNIWAIARDPGYWEDPLSFLPERFLSSNIDFRGQDFEYLPFGAGKRICPGISLGLRMVHLVLASIIHSFSWKLPQGITPESLDMKEQFGVTLKKVVPLCAIPFIEEKCSP* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0935 501 Gene3D Cytochrome P450 26 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 SUPERFAMILY Cytochrome P450 32 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 CDD CYP76-like 59 493 - -
Vvi2g0935 501 FunFam Cytochrome P450 76C4 25 492 - -
Vvi2g0935 501 Pfam Cytochrome P450 32 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Vvi2g0935 501 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0935 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0935 Vvi-Chr2 12824359 12826672 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0935 4 493 Cytochrome P450 AT2G45550 41.767 6.61e-143 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0935 - - vvi:100263035 994.186