Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0933 ATGAGATTCCATCCGCTTGCTCCTCATCTCTTACCATATAAGGCAAAGTATTACCTAGAAATATTGGGTTTCACCATACCGAAGGACAGTAATGTTTTAGTGAATATTTGGGCTATTGCAAGAGATCCAAGATACAGGGAGGATCCATTATCATTCCTTCCTGAAAGATTCTTGAGCTTTAACATAGATTTTAGAGGTCGAGATTTTGAATACCTACCATTTGGAGCAGGTAAGCGAATCTGCCCAGGCATACCCCCTGGTCTAAGAATGGTTCACTTCGTACTAGCTTCCATTATTCATTCGTTCAGTTGGAAGTTTCCTCAGGGAATCACTCTGGAGAGCCTCAACATGAAAGAGCAGTTTGGAGTTACCCTAAAAAAGGTCATTCCCCTTTGCGCCATTCCATTTATAGAAGAAAAATGTTCTCAATAA 432 0.4051 MRFHPLAPHLLPYKAKYYLEILGFTIPKDSNVLVNIWAIARDPRYREDPLSFLPERFLSFNIDFRGRDFEYLPFGAGKRICPGIPPGLRMVHFVLASIIHSFSWKFPQGITLESLNMKEQFGVTLKKVIPLCAIPFIEEKCSQ* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0933 143 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 74 83 IPR017972 GO:0005506|GO:0016705
Vvi2g0933 143 SUPERFAMILY Cytochrome P450 1 133 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0933 143 Gene3D Cytochrome P450 1 130 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0933 143 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 136 - -
Vvi2g0933 143 Pfam Cytochrome P450 1 123 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0933 143 PRINTS E-class P450 group I signature 81 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0933 143 PRINTS E-class P450 group I signature 35 59 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0933 143 PRINTS E-class P450 group I signature 71 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0933 Vvi-Chr2 12817478 12817909 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0933 2 136 Cytochrome P450 AT1G33720 54.815 5.40e-52 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0933 - - vvi:100263035 251.521