Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0855 ATGCCAGAGAGGTTCTTAGGATCAGATATGGATGTGAGGGGCCAGAATTTTGAGCTGATCCCATTCGGTGCCGGTAGGCGAATCTGTCCAGGTATCCGGATGATTCACTTGATGCTGGCTTCACTCCTTCACTCCTATGATTGGAAGCTTGAAGATGGGGTGACACCGGAGAACATGAACATGGAAGAAAAGTTTGGCGTCACCTTACAGAACGCTCAGCCTCTGCGTGCTCTCCCTACCCTTGTATGA 249 0.502 MPERFLGSDMDVRGQNFELIPFGAGRRICPGIRMIHLMLASLLHSYDWKLEDGVTPENMNMEEKFGVTLQNAQPLRALPTLV* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0855 82 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 80 - -
Vvi2g0855 82 SUPERFAMILY Cytochrome P450 1 78 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0855 82 FunFam Uncharacterized protein 1 80 - -
Vvi2g0855 82 Pfam Cytochrome P450 1 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0855 82 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 22 31 IPR017972 GO:0005506|GO:0016705
Vvi2g0855 82 Gene3D Cytochrome P450 1 78 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0855 Vvi-Chr2 9320892 9321140 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0855 2 79 Cytochrome P450 AT2G45570 58.537 6.23e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0855 - K23810 vvi:100232891 147.132