Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0853 ATGGCCATTTGGACCATTGTCTCCCTCAACTCGCCTAGAAGACGCAAATCTGGTGCTGGCAAGCTTCCGCCTGGACCTGTCCCGTTTCCAATCATTGGAAACCTTTTAAACCTTGGAAACAAACCCCATGAATCCCTCGCCAACCTTGCCAAAATTCACGGCCCCGTGATGACTCTCGAGCTTGGCTGTGTAACCACAGTAGTCATCACATCTGCAACCATGGCCAAAGAAGTCCTCCAAAAGAAGGACCAGTCCTTCTGCAACCGAACTATTCCTGATGCCCTCCGAGCCCATAACCACAACCAGCTCTCCGTGGTATGGTTGCCCGCTTCCACAAAGTGGAGAACCCTTCGGAAGATGGGCGTTGGAGTCTAG 375 0.5227 MAIWTIVSLNSPRRRKSGAGKLPPGPVPFPIIGNLLNLGNKPHESLANLAKIHGPVMTLELGCVTTVVITSATMAKEVLQKKDQSFCNRTIPDALRAHNHNQLSVVWLPASTKWRTLRKMGVGV* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0853 124 Pfam Cytochrome P450 23 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0853 124 Gene3D Cytochrome P450 7 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0853 124 PANTHER CYTOCHROME P450 FAMILY 1 13 120 - -
Vvi2g0853 124 SUPERFAMILY Cytochrome P450 21 120 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0853 Vvi-Chr2 9314941 9320028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0853 6 122 Cytochrome P450 AT2G45550 48.739 1.36e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0853 - - vvi:109124362 232.261