Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0852 ATGGACTTGATGAGCTATTTGCTATGTCTTCTTGTCGCCTGGACCTCAATTTACATCGTTGTCTCAGCTAGAAGAAGCAAATCTGGTGCTGGCAAGCTTCCGCCTGGACCTGTCCCATTTCCGATCATTGGAAACCTTTTAAACCTTGGAAACAAACCCCATGAATCCCTGGCTAACCTTGCCAAAATTTATGGCCCCGTGATGAGTCTCAAGCTTGGCTGTGTAACCACAGTAGTCATCACATCTGCAACCATGGCCAAAGAAGTCCTCCAAAAGAAGGACCAGTCCTTCTGCAACCGAACCATTCCTGATGCCCTCCGAGCCCTTAACCACAACCAGATCTCCATGGTGTGGCTACCCGTTTCCACAAAGTGGAGAACCCTTCGGAAGATATGCAATTCACACATATTCACGAATCAAAAACTAGACTCCAGCAACTACCTCCGCCACCAGAAAGTGCAAGACCTTCTAGCCAATGTTGAACAAAGCTGCCAGGCTGGTGATGTAGTAGATATTGGCCAAGAAGCTTTCAGAACTACTCTTAACTTGTTATCAAACACCACTTTTTCTGTGGATCTGGTAGAACCAAGTTCTGATACTGTGCAGGAGTTTAAGGAGTTAGTACGGCATATGATGGAAGAAGCTGCGAAACCCAATTTGGCAGATTATTTTCCGGTTGTTAGGAAGATCGATCCACAGGGTATAAGGCGTCGTATGGCAATTCATTTTGGAAAGATGATTAAGGTGTTGGATAAAAAGGTCAAGCAACGTCTGCGGTCAAGACAAGTGCAGGGTTGGATGGCTAGCAGCGATGTGTTAGATACTCTTCTCAACATCAGTGAAGACAGCAATAATTTTCTTGATATAACTCATATTGACCACTTGTTACTGGACCTATTTGTTGCGGGGACTGATACAACTGCGAACACATTGGAATGGGCAATGGCAGAACTATTGCACAACCCGGAAACACTGTTGAGAGTTCAAGCAGAGCTCCGTCAAACCATAGGTAAAGACAAACTGGTAAAAGAATCAGACATCGCCCGACTTCCATACTTGCAAGCAGTGGTGAAAGAAACCTTCCGATTGCATCCAGCGGTTCCATTCTTACTCCCACGCAAAGTCGAAGTAGACACAGAAATGTGTGGGTTCATTGTCCCAAAGGATGCACAAGTACTTGTAAATGTGTGGGCTATAGGCCGAGATCCCAATCTGTGGGAGAACCCCAACTTGTTTATGCCAGAGAGGTTCTTGGGATCGGATATGGATGTGAGGGGCCAGAACTTTGAGCTAATCCCATTCGGTGCCGGTAGGCGAATCTGTCCGGGGTTGCTACTAGGTATCCGGATGGTTCAATTGATGTTGGCTTCACTCATTCACTCCAATGACTGGAAGCTTGAAGATGGGCTGACACCAGAGAATATGAACATGGAAGAAAAGTTTGGCTTCACCTTACAGAAGGCTCAGCCCCTGCGTGTTCTCCCTATCCATTTTTAA 1497 0.4603 MDLMSYLLCLLVAWTSIYIVVSARRSKSGAGKLPPGPVPFPIIGNLLNLGNKPHESLANLAKIYGPVMSLKLGCVTTVVITSATMAKEVLQKKDQSFCNRTIPDALRALNHNQISMVWLPVSTKWRTLRKICNSHIFTNQKLDSSNYLRHQKVQDLLANVEQSCQAGDVVDIGQEAFRTTLNLLSNTTFSVDLVEPSSDTVQEFKELVRHMMEEAAKPNLADYFPVVRKIDPQGIRRRMAIHFGKMIKVLDKKVKQRLRSRQVQGWMASSDVLDTLLNISEDSNNFLDITHIDHLLLDLFVAGTDTTANTLEWAMAELLHNPETLLRVQAELRQTIGKDKLVKESDIARLPYLQAVVKETFRLHPAVPFLLPRKVEVDTEMCGFIVPKDAQVLVNVWAIGRDPNLWENPNLFMPERFLGSDMDVRGQNFELIPFGAGRRICPGLLLGIRMVQLMLASLIHSNDWKLEDGLTPENMNMEEKFGFTLQKAQPLRVLPIHF* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0852 498 FunFam Cytochrome P450 76C4 25 494 - -
Vvi2g0852 498 CDD CYP76-like 61 495 - -
Vvi2g0852 498 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0852 498 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0852 498 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0852 498 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0852 498 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0852 498 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0852 498 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0852 498 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0852 498 SUPERFAMILY Cytochrome P450 34 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0852 498 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0852 498 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0852 498 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0852 498 Gene3D Cytochrome P450 18 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0852 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vvi2g0852 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 496 - -
Vvi2g0852 498 Pfam Cytochrome P450 34 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0852 Vvi-Chr2 9295261 9300215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0852 1 496 Cytochrome P450 AT2G45550 47.525 4.80e-175 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0852 - K23810 vvi:100254114 981.474