Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0807 ATGCCTTCTTGCAGGTATAACGACTGGATCAAGAACCTGTATAAGTTGAAATCACGCGTCTACCCATCTGGCAACTACGTGGATCATCAAAGACGCGAGGCATCAACACACGTGACTTACCAAAAACTCAACACCTTGGAAAAATATACTTCTGATACCCTTCTCCCAACCATCCAAATTAATCTTGGAACTACCTACTCTTGCACCAAAGTATGGCAACACGACCGTGTCGAGATCATCGCCAACAATCAAGGCAACGAGACTACTCCCTCTTACATCACTTTCACTTATACAAAGTGTTTGATCGGTGATGCCGCTGAGAATCAGGTTGCTACGAACCCTATTAACACTGTTTTCAATGCAAAGCATCTAATTGGTAGGAGATTCACCGATTCCTCTGTTTAG 405 0.4346 MPSCRYNDWIKNLYKLKSRVYPSGNYVDHQRREASTHVTYQKLNTLEKYTSDTLLPTIQINLGTTYSCTKVWQHDRVEIIANNQGNETTPSYITFTYTKCLIGDAAENQVATNPINTVFNAKHLIGRRFTDSSV* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0807 134 PRINTS 70kDa heat shock protein signature 84 96 - -
Vvi2g0807 134 PRINTS 70kDa heat shock protein signature 106 114 - -
Vvi2g0807 134 PRINTS 70kDa heat shock protein signature 56 69 - -
Vvi2g0807 134 PANTHER HEAT SHOCK PROTEIN 70KDA 58 134 IPR013126 GO:0005524|GO:0140662
Vvi2g0807 134 SUPERFAMILY Actin-like ATPase domain 60 132 IPR043129 -
Vvi2g0807 134 Gene3D - 51 134 - -
Vvi2g0807 134 FunFam heat shock 70 kDa protein-like 51 129 - -
Vvi2g0807 134 Pfam Hsp70 protein 58 134 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0807 Vvi-Chr2 8260076 8260480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0807 56 134 Calmodulin-binding Proteins AT5G02500 75.949 2.06e-38 134