Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0795 ATGGTCTCAAGGTCCTATTCTAATCTCTTGGATCTCGTGTCTGGGGATTCCCCCACATTTGGCCGAGGGGGGAAGAAGATATCTCGAGTGGCAACTGTTGCTGGAGTATTGTCTGAGCTTGATGATGAGACCTCCAATAGTGTGACCTCTGATGCTCCTTCATCTGTATCTCAGGATCGGATGATAATTGTGGGAAACCAGCTTCCACTCCGGGCTCATCGGAGCTCAGATGGCAGTGGAGAGTGGTGTTTCAGCTGGGATGAGGACTCCCTTCTCTTACAGCTCAAAGATGGGCTTGGAGAAGACGTAGAAGTACTCTATGTTGGTTGTCTTAGAGAACAAATTGACCCAAGTGAACAAGATGATGTTGCTCAAACCTTGCTTGAAACCTTCAAATGTGTCCCCGCCTTCATCCCTCCTGAGTTATTTAGTAAATTCTATCATGGGTTCTGTAAACAGCAATTGTGGCCTTTGTTTCATTACATGCTTCCTCTCTCCCCAGACCTTGGTGGTAGGTTTGATAGGTCCCTCTGGCAAGCTTATGTCTCGGTGAACAAAATATTTGCAGATAAAGTAATGGAAGTGATTACCCCTGATGAAGATTTTGTGTGGGTTCATGATTACCATTTGATGGTTTTGCCAACATTTTTGAGGAAGAGGTTTAATAGGGTGAAGCTTGGGTTCTTCCTGCACAGTCCGTTCCCATCATCAGAGATATACCGGACACTTCCTGTAAGAGATGAGCTTCTAAGAGCACTTCTGAATTCTGACCTAATTGGCTTTCATACTTTTGATTATGCCAGGCACTTCCTCTCTTGTTGTAGTAGAATGCTTGGCCTTGCTTATCAATCTAAGCGAGGCTACATAGGGCTTGAGTATTATGGTCGAACCGTTAGCATTAAGATTCTTCCTGTTGGAATTCATATGGGACAACTTCGGTCTGTGCTGAATCTTCCAGAGACTGACTCTCGAGTTGCAGAGTTACGGGACCAGTTTAGGGGTCAGACTGTTTTGCTTGGGGTTGATGACATGGACATCTTCAAAGGGATCAGTTTGAAGCTTTTGGCAATGGAACAATTGCTTACACAACATCCTGACAAGAGGGGCAAGGTTGTGTTGGTTCAAATTGCAAACCCTGCCAGAGGCCGAGGAAAGGATGTACAGGAGGTTCAATCTGAAACCCATGCGACAGTAAGGAGAATTAATGAGACATTTGGACGTCCAGGATATCATCCAGTGGTTTTAATTGATACACCCCTTCAGTTCTATGAGCGGATTGCTTATTATGTAACTGCAGAGTGCTGTCTCGTTACAGCAGTGAGGGATGGAATGAACCTTATACCTTATGAATATATTATATGCCGTCAAGGAAATGAAAAGCTTGATGAGACCCTGGGACTAAATCCATCAACACCCAAAAAGAGCATGCTGGTGGTTTCTGAGTTCATTGGGTGTTCTCCATCACTAAGCGGGGCAATTCGAGTCAACCCATGGAACATTGATGCTGTAGCTGAAGCTATGGAGTCTGCCTTAATTGTCCCTGAGCCAGAGAAACAGATGCGACATGAGAAGCATTATAGGTATGTGAGTACACATGATGTTGCTTATTGGGCACATAGTTTTTTGCAGGATCTTGAAAGGGCCTGTAGGGATCATGTGAGGAGGAGGTGCTGGGGTATTGGTTTTGGTTTAGGGTTCCGGGTAATTGCTTTGGACCCGAATTTCAGGAAGCTTTCAGTTGAGCATATTGTTTCAGCTTATAAGAGGACCAAGAATCGGGCAATTCTTTTGGATTGTGATGGTACCATGATGCTGCAGAGTTCAATCAGTACAATTCCTAATACAGAGGCTATAGGGATCTTGAATAACTTGTGTGGTGATCCCAAGAATGTTGTCTTCGTTGTTAGTGGGAAGGACAAGAAGACTCTTACTGAAGGGTTTTCTTCTTGTGAGAAGCTTGGGATTGCAGCTGAGCATGGTTATTTTTTGAGGCTAAGTCATGATGCAGAGTGGGAAACTTGCTTGCCTGTGACAGACTTTGATTGGAAACAGATTGCAGAGCCAGTTATGAAATTATACACTGAAACAACTGATGGTTCTACCATAGAGACCAAAGAAAGTGCACTTGTTTGGAATTATCAATATGCAGATCCGGATTTTGGCTCTTGCCAGGCTAAGGAGCTTCTAGATCACCTGGAAAGTGTTCTTGCCAATGAGCCAGTTTCTGTCAAGAGTGGTCAACATATTGTAGAAGTTAAACCTCAGGGTGTCAACAAGGGTCTTGTAGCGGAACGTCTCCTTGTAACAATGCGGCAGAAGGGGATGCTTCCAGATTTTGTGCTATGTATTGGAGATGATCGATCGGATGAGGACATGTTTGAAGTGATAATAAGGGCAAAGGGGCTTCCTTCTCTCTCCCCAGTTGCTGAAGTGTTTGCTTGCACTGTTGGTAGGAAACCCAGCAAAGCTAAGTACTACTTAGAAGACACAACTGAGATATTGAGAATGTTACAGGGCCTTGTGACTGCATCCGAGCAGGCTGCTAGAAATGCTTCCCATGTAGCTTCCACGCGGGCGATTATCGACAGAGAGTAA 2595 0.4455 MVSRSYSNLLDLVSGDSPTFGRGGKKISRVATVAGVLSELDDETSNSVTSDAPSSVSQDRMIIVGNQLPLRAHRSSDGSGEWCFSWDEDSLLLQLKDGLGEDVEVLYVGCLREQIDPSEQDDVAQTLLETFKCVPAFIPPELFSKFYHGFCKQQLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVITPDEDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLAYQSKRGYIGLEYYGRTVSIKILPVGIHMGQLRSVLNLPETDSRVAELRDQFRGQTVLLGVDDMDIFKGISLKLLAMEQLLTQHPDKRGKVVLVQIANPARGRGKDVQEVQSETHATVRRINETFGRPGYHPVVLIDTPLQFYERIAYYVTAECCLVTAVRDGMNLIPYEYIICRQGNEKLDETLGLNPSTPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMESALIVPEPEKQMRHEKHYRYVSTHDVAYWAHSFLQDLERACRDHVRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKNRAILLDCDGTMMLQSSISTIPNTEAIGILNNLCGDPKNVVFVVSGKDKKTLTEGFSSCEKLGIAAEHGYFLRLSHDAEWETCLPVTDFDWKQIAEPVMKLYTETTDGSTIETKESALVWNYQYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVNKGLVAERLLVTMRQKGMLPDFVLCIGDDRSDEDMFEVIIRAKGLPSLSPVAEVFACTVGRKPSKAKYYLEDTTEILRMLQGLVTASEQAARNASHVASTRAIIDRE* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0795 864 SUPERFAMILY HAD-like 593 841 IPR036412 -
Vvi2g0795 864 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 722 853 - -
Vvi2g0795 864 Pfam Trehalose-phosphatase 596 830 IPR003337 GO:0003824|GO:0005992
Vvi2g0795 864 Gene3D Glycogen Phosphorylase B; 314 530 - -
Vvi2g0795 864 FunFam Trehalose-6-phosphate synthase 2 676 755 - -
Vvi2g0795 864 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 313 - -
Vvi2g0795 864 NCBIfam HAD-IIB family hydrolase 595 797 IPR006379 -
Vvi2g0795 864 Gene3D - 722 856 IPR023214 -
Vvi2g0795 864 Gene3D - 592 707 IPR023214 -
Vvi2g0795 864 FunFam Alpha,alpha-trehalose-phosphate synthase 315 530 - -
Vvi2g0795 864 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 709 - -
Vvi2g0795 864 Gene3D Glycogen Phosphorylase B; 53 313 - -
Vvi2g0795 864 CDD GT20_TPS 60 546 IPR001830 GO:0003824|GO:0005992
Vvi2g0795 864 CDD HAD_TPP 594 830 - -
Vvi2g0795 864 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 46 841 IPR001830 GO:0003824|GO:0005992
Vvi2g0795 864 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 550 - -
Vvi2g0795 864 NCBIfam trehalose-phosphatase 591 841 IPR003337 GO:0003824|GO:0005992
Vvi2g0795 864 Pfam Glycosyltransferase family 20 60 546 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0795 Vvi-Chr2 8014905 8022371 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0795 1 852 Trehalose Biosynthesis Gene Families AT4G17770 80.513 0.0 1456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0795 K16055 - vvi:100259175 1744.17