Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0784 ATGGCACTGGCTCCAGTTTCTCCACACCACACGTCTCCAATTGTGTGTGTAATGGACGCCTCCAGCACCCTCGGCTCCACTCTCGTCGGCAGCCTCCTCCTAAGAGGCTATACGGTCCATGCTGCGGTCCAAAACCATGCAGGTGAAATTCAACTGTTGAATGGGCTTTCTTGTGATACCCAGAAGCTGAAGATCTTTCACTCTGATCCCTTCGACTACCAGAGCATAATGGACGCGCTCAAGGGCTGCTCCGGCTTGTTTTACACCTTCGAGCCTCCCCATGACCAGACTTCCTATGATGAACTAATGGCAGACGTGGAAGTGAGAGCAGCCCACAATGTAATTGAAGCATGCGCACAAACAGAGACAATAGAGAAAGTAGTTTTCACATCATCAGTAACTGCAGTCGTTTGGAGGGATGATCGTAAATCAATACCATCCGATTTGGACGAGACACATTGGACGGACATCAATTTTTCTCGTAAATTCAAGTTGTGGCATGCGATGTCGAAGACGCTGGCCGAGAAGAGTGCATGGGCCTTGGCCATGGACAGGGGAGTTAATATGGTGTCTGTCAATGCAGGATTGTTGATGGCTCCTGATCTCACCATCACTCATCCCTATTTAAAAGGAGCGGCTGAGATGTACGAAGATGGCGTTTTCGTGACCGTTAGTGTTGACTTCTTGGTGGATGCCCACATCTGCGTCTTCGAGGATGTCTCATCCTACGGTCGATATTTGTGCTTCAACCATATCATCAATAACAATGAAGATGCCCTTAAGCTTGCCAAAACGTTGGCTCCATCTGCTCCTTCACCACCTCAGAGCTGCGACCGGGATATGAAGATGATCCAGCAGAGAATAAGCAACAAGAAGCTGAACAAACTGATGGTCAATTTCGCGGGTGGGCCCAAGGACAGGATGGTCTGA 930 0.4914 MALAPVSPHHTSPIVCVMDASSTLGSTLVGSLLLRGYTVHAAVQNHAGEIQLLNGLSCDTQKLKIFHSDPFDYQSIMDALKGCSGLFYTFEPPHDQTSYDELMADVEVRAAHNVIEACAQTETIEKVVFTSSVTAVVWRDDRKSIPSDLDETHWTDINFSRKFKLWHAMSKTLAEKSAWALAMDRGVNMVSVNAGLLMAPDLTITHPYLKGAAEMYEDGVFVTVSVDFLVDAHICVFEDVSSYGRYLCFNHIINNNEDALKLAKTLAPSAPSPPQSCDRDMKMIQQRISNKKLNKLMVNFAGGPKDRMV* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0784 309 Gene3D - 7 307 - -
Vvi2g0784 309 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 23 176 IPR002225 GO:0003854|GO:0006694|GO:0016616
Vvi2g0784 309 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 7 305 - -
Vvi2g0784 309 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 14 293 - -
Vvi2g0784 309 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 293 IPR036291 -
Vvi2g0784 309 CDD FR_SDR_e 15 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0784 Vvi-Chr2 7838639 7840420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0784 14 300 Monolignol Biosynthesis Gene Families AT5G58490 33.224 1.08e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0784 - - vvi:100253987 608.986