Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0771 ATGGGTGCTGGGGGTCCTGATGAGGAAGACAACAGGTGGCCGCCATGGTTGAAACCACTGCTGAGGGAGAGCTTCTTTGTTCAATGCAAGTTGCATGCTGACTCTCACAAGAGCGAATGCAATATGTATTGCTTGGACTGCATGAATGGAGCTCTCTGTTCTCTCTGTCTGGGCTATCACAAGGATCATCGTGCTATTCAGATAAGGAGATCATCATACCATGATGTGATCAGGGTTTCTGAGATTCAGAAAGTGCTGGACATCACCGGTGTCCAGACCTACATTATCAACAGCGCAAGAGTCGTCTTCCTGAATGAACGCCCGCAGCCTAGGCCTGGAAAAGGAGTCACCAACACCTGCGAGGTCTGCGAGCGTAGCCTCCTCGATTCATTCCGCTTCTGTTCCCTTGGCTGCAAGATTGTGGGTACGTCAACGAATTTCCAGAAGAAGAAGCATCAGCAGCCGGCGACAGCGTCGTCGGACTCGGAGGAATCGTACAGTAGCAGCAGCCATGGGCGGCAGGCGCTGAACGCAGTCCAGAGTTTTAGTCCCTCGACACCTCCCCCAACTGCAGTAAATTACAGAACGGCCAAGCGAAGAAAGGGGATTCCGCACAGGGCCCCAATGGGAGGACTAATCATAGAATACTATTAG 654 0.5199 MGAGGPDEEDNRWPPWLKPLLRESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLGYHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSTNFQKKKHQQPATASSDSEESYSSSSHGRQALNAVQSFSPSTPPPTAVNYRTAKRRKGIPHRAPMGGLIIEYY* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0771 217 MobiDBLite consensus disorder prediction 149 192 - -
Vvi2g0771 217 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 209 - -
Vvi2g0771 217 MobiDBLite consensus disorder prediction 149 205 - -
Vvi2g0771 217 Pfam PLATZ transcription factor 69 140 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0771 Vvi-Chr2 7559441 7561103 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vvi2g0771 PLATZ 3.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0771 - - vvi:100250554 448.358