Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0756 ATGACTGGAGTGCTATCCTGGTGTCTCTCATATACAGTTCCAACAATTTCTAACTCAACTGCATTGCAGGGACCTGTTGTGTCCCTCTGTAAGAATCTCAAACACCCTGTGGATATTGCACCACATTGCCCCAATATGGCAGACGTAGCTAAGGACCTAACTGCTGGGACTGTTGGAGGGGCAGCACAGTTGATTGTGGGTCACCCTTTTGATACCATTAAGGTCAAGCTTCAAAGCCAGCCTCCTCCACTCCCTGGCCAACCCCCCAAGTTCTCTGGTGCAATGGATGCTGTCAGGCAGACAGTAGCAGCAGAAGGCCCAAGGGGTTTGTACAAAGGTATGGGGGCACCTCTTGCCACTGTAGCAGCCTTCAATGCTGTACTCTTCTCAGTGAGGGGCCAAATGGAGGCATTACTGAGGTCTCAACCTGGTGCCCCACTTACAGTCAACCAGCAGATCGTTGCTGGGGCTGGGGCTGGAGTTGCTGTTTCCTTTCTTGCTTGCCCAACTGAATTGATCAAGTGCAGGCTTCAAGCTCAGAGTGCACTGGCAAGTTCTGGTTCACCTGGAGTGGCAGTGAAGTATGGAGGGCCAATGGATGTGGCGAGGCATGTTATCAAATCAGAAGGTGGTGTGAGGGGTCTTTTCAAGGGTTTGGTGCCAACTATGGCACGTGAAATACCTGGAAACGCTGCAATGTTTGGTGTCTATGAAGCACTGAAGCAATATCTTGCAGGTGGCCCAGACACATCTGGGTTGGGAAGAGGCTCTTTGATTTTGGCTGGAGGCCTGGCTGGAGCTTCCTTCTGGGCTTCTGTCTACCCAACCGATGTGGTCAAGAGTGTAATTCAGGTGGATGATTATAAAAATCCAAAGTTCTCTGGCTCAATTGACGCCTTCAGGAAAACCTTGGCTTCAGAGGGAGTCAAAGGCCTGTACAAGGGGTTCGGACCTGCCATGGCTCGAAGTGTGCCAGCAAATGCAGCATGCTTCTTGGCATATGAGGTGACAAGATCAAGTTTAGGATGA 1029 0.5073 MTGVLSWCLSYTVPTISNSTALQGPVVSLCKNLKHPVDIAPHCPNMADVAKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPPPLPGQPPKFSGAMDAVRQTVAAEGPRGLYKGMGAPLATVAAFNAVLFSVRGQMEALLRSQPGAPLTVNQQIVAGAGAGVAVSFLACPTELIKCRLQAQSALASSGSPGVAVKYGGPMDVARHVIKSEGGVRGLFKGLVPTMAREIPGNAAMFGVYEALKQYLAGGPDTSGLGRGSLILAGGLAGASFWASVYPTDVVKSVIQVDDYKNPKFSGSIDAFRKTLASEGVKGLYKGFGPAMARSVPANAACFLAYEVTRSSLG* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0756 342 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 47 341 - -
Vvi2g0756 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 253 340 IPR018108 -
Vvi2g0756 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 147 243 IPR018108 -
Vvi2g0756 342 Pfam Mitochondrial carrier protein 49 140 IPR018108 -
Vvi2g0756 342 Pfam Mitochondrial carrier protein 148 245 IPR018108 -
Vvi2g0756 342 Pfam Mitochondrial carrier protein 259 340 IPR018108 -
Vvi2g0756 342 Gene3D Mitochondrial carrier domain 9 142 IPR023395 -
Vvi2g0756 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 47 138 IPR018108 -
Vvi2g0756 342 SUPERFAMILY Mitochondrial carrier 45 335 IPR023395 -
Vvi2g0756 342 Gene3D Mitochondrial carrier domain 143 341 IPR023395 -
Vvi2g0756 342 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 48 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0756 Vvi-Chr2 7361994 7365302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0756 194 341 Antiporters AT1G79900 25.503 4.19e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0756 K15109 - vvi:100257503 529.25