LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi2g0741	ATGGGAAGCGGATTGTCGCAGCTATGCCCTTGCTTTGTGCCGGCCAGCAGGACGGCGGTCGAGGAGCCGGAGGTGGTCTTCACGGCCTCCGAGCCCCTAGATGAAACCCTAGGGCATTCTTTTTGTTATGTGCGCTCTTCCGCTAGGTTTTTGTCTCCGACGCAGTCCGATCGGTTTGTGTCGCCTAGTCACTCGCTCCGGTTCTCACCGTCGCACGAGCCGGTGGGGAGGGCGCGGGCTGGTCCGCCGGAGACCGGGTTCAAGGCCATTTCGGGAGCTTCGGTGAGCGCTAACACGTCGACGCCGAGGACGGTTCTCCAGCTGGAGAATATTTACGATGATGCCACTGACTGCGTGGGCGGTGGCGTCAAGGGGAGTATAGTGAATGGCTTCGAGAGCACGGCGTCGTTTAGTGCTCTGCCGCTGCAGCCGGTGCCCAGGGGCGGTGAAGCTTCCGGTCCGATTGACCGCGGCTTCTTTATGTCCGGTCCGATCGAGCGAGGCGCTCTGTCCGGTCCCCTCGATGCCAACGCCGGCTCTGACGGCGGAAGAGTCCATTTCTCGGCTCCATTAAACGGACTTTATGTGAAAAAGAAGAGGAAGAAGGGTATTTCGGCAATTCGGAAGGCTTTTTACCGGAATTTTTCCGAGAAGAAGCGACCGTGGGTGGTGCCGGTGCTGAATTTCGTCGGCCGGAAGGAAGTTCCTGCGGCCGGAGATGGGGGCGACTCGGAGGTGAAGAGTGAGAGCAATGTTCAGTGGGCTTTAGGGAAGGCGGGGGAGGATCGGGTGCATGTGGTTGTATCCGAAGAGCATGGGTGGTTGTTTGTTGGGATTTATGATGGGTTTAACGGCCCTGATGCTCCCGAATTCTTGATGGGTAATCTCTACCGTGCTGTATTTAATGAGCTAGAAGGTTTATTTTGGGATGTTGAGGAAGCCGATCCAATAGTTTCAGGACAAGAATGTTCAAATGTAACTTCAGAAAATGTGGTCATTGTAGAGGAAGCCACCAATCAATCGATGGAGAGCTGTGTTGGAGAGGTTGGAAATGAGTCGAATAATAAGGAAATTGGCGTCGGTCATGAAGATTCAAACCCGCCGCCTACTGATCGAGGATCAGCAAAAAGGGTGACATTTCAACCTGAACCACCAGAGATTAGACGAAGGCGTCTATGGGAATTTCTTGCTGAGGATGATCAGGAAGATGGGCTTGATCTTTCTGGTTCAGACCGATTTGCATTTTCCGTTGATGATGCACTTAGTGTAAACAATGCAGGGTCTGCAGTAAGTAGGCGATGGTTGTTGTTGTCAAAATTGAAGCATGGGTTATCAAAGCATAAGGAGGGCCATGGTCGAAAACTATTTCCATGGAGGTTTGGTTTAGAGGATAAAGAGAAAGTTGAAGTTGATAATAGAGTAGAGGAGACGTCAGGTTCCAGAGGTAGGAAAAGGAAAGTGGGTCCTGTTGATCATGAGTTGGTATTGAAGGCAATGTCTCGGGCCTTAGAATTGACTGAGCTTGCATATTTGGACATGACAGATAAGGTTCTTGATCAGAATCCAGAGCTTGCTCTGATGGGTTCTTGTTTACTGGTTGTGCTCATGAGAGATGAGGATGTGTATGTGATGAATGTTGGTGATAGCCGCGCTCTTGTTGCACAGTATGAAACGCAAGAAGGTAGTTCTAGTGTGGAGTCTAAGGGGGAGGGGAAGAATAGGTCAAACATAGATGATATAGTTGAAGTGTCCACAGATGGCTGTGAGAAAGAAAATAAGGTGGTAAATGAAGATTTTGTTAAAGGGATGCGGTTGACTGCATTGCAATTGTCCACTGATCACAGCACAAGCATTGAAGAAGAAGTCATAAGAATCAAGAATGAACACCCAGATGACAGCCAATGTATAGTCAACGATAGAGTGAAAGGTCGTCTTAAGGTCACCAGAGCATTTGGTGCTGGATTTCTCAAACAGCCCAAATGGAATGATGTTCTATTAGAAATGTTTCGGAATGAGTATATTGGCACTGCACCTTACATATCATGTTCGCCTTCCCTTTGTTATCACCAACTCTGTCCGAGAGATCAGTTTCTGATCCTCTCATCTGATGGGTTATATCAGTATTTAAGCAATCAAGAAGTGGTTTGTGAGGTCGAGAAATTCATGGAGAAGTTTCCTGAAGGAGACCCTGCCCAGCATTTGATAGAGGAGCTTCTTTCCCGTGCTGCAAAGAAAGCTGGGTTGAATTTCCATGAATTGCTGGACATCCCACAAGGAGACCGCCGGAAGTACCATGATGATGTCACTGTCATGGTGATCTCCCTAGAAGGGAGAATTTGGAAATCATCTGGGAAATACCTCTGA	2364	0.4894	MGSGLSQLCPCFVPASRTAVEEPEVVFTASEPLDETLGHSFCYVRSSARFLSPTQSDRFVSPSHSLRFSPSHEPVGRARAGPPETGFKAISGASVSANTSTPRTVLQLENIYDDATDCVGGGVKGSIVNGFESTASFSALPLQPVPRGGEASGPIDRGFFMSGPIERGALSGPLDANAGSDGGRVHFSAPLNGLYVKKKRKKGISAIRKAFYRNFSEKKRPWVVPVLNFVGRKEVPAAGDGGDSEVKSESNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVFNELEGLFWDVEEADPIVSGQECSNVTSENVVIVEEATNQSMESCVGEVGNESNNKEIGVGHEDSNPPPTDRGSAKRVTFQPEPPEIRRRRLWEFLAEDDQEDGLDLSGSDRFAFSVDDALSVNNAGSAVSRRWLLLSKLKHGLSKHKEGHGRKLFPWRFGLEDKEKVEVDNRVEETSGSRGRKRKVGPVDHELVLKAMSRALELTELAYLDMTDKVLDQNPELALMGSCLLVVLMRDEDVYVMNVGDSRALVAQYETQEGSSSVESKGEGKNRSNIDDIVEVSTDGCEKENKVVNEDFVKGMRLTALQLSTDHSTSIEEEVIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVLLEMFRNEYIGTAPYISCSPSLCYHQLCPRDQFLILSSDGLYQYLSNQEVVCEVEKFMEKFPEGDPAQHLIEELLSRAAKKAGLNFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL*	788

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi2g0741	787	CDD	PP2Cc	491	775	IPR001932	-
	Vvi2g0741	787	MobiDBLite	consensus disorder prediction	351	381	-	-
	Vvi2g0741	787	PANTHER	PROTEIN PHOSPHATASE 2C	246	774	IPR015655	GO:0004722\|GO:0006470
	Vvi2g0741	787	Gene3D	-	398	782	IPR036457	-
	Vvi2g0741	787	ProSiteProfiles	PPM-type phosphatase domain profile.	245	775	IPR001932	-
	Vvi2g0741	787	Gene3D	-	232	377	IPR036457	-
	Vvi2g0741	787	SMART	PP2C_4	245	773	IPR001932	-
	Vvi2g0741	787	Pfam	Protein phosphatase 2C	609	742	IPR001932	-
	Vvi2g0741	787	SUPERFAMILY	PP2C-like	257	776	IPR036457	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi2g0741	Vvi-Chr2	7063170	7078684	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi2g0741	1	787	PP2C-type Phosphatase Gene Family	AT2G35350	59.318	0.0	847

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi2g0741	-		-	vvi:100264235	1563.9

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