Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0741 ATGGGAAGCGGATTGTCGCAGCTATGCCCTTGCTTTGTGCCGGCCAGCAGGACGGCGGTCGAGGAGCCGGAGGTGGTCTTCACGGCCTCCGAGCCCCTAGATGAAACCCTAGGGCATTCTTTTTGTTATGTGCGCTCTTCCGCTAGGTTTTTGTCTCCGACGCAGTCCGATCGGTTTGTGTCGCCTAGTCACTCGCTCCGGTTCTCACCGTCGCACGAGCCGGTGGGGAGGGCGCGGGCTGGTCCGCCGGAGACCGGGTTCAAGGCCATTTCGGGAGCTTCGGTGAGCGCTAACACGTCGACGCCGAGGACGGTTCTCCAGCTGGAGAATATTTACGATGATGCCACTGACTGCGTGGGCGGTGGCGTCAAGGGGAGTATAGTGAATGGCTTCGAGAGCACGGCGTCGTTTAGTGCTCTGCCGCTGCAGCCGGTGCCCAGGGGCGGTGAAGCTTCCGGTCCGATTGACCGCGGCTTCTTTATGTCCGGTCCGATCGAGCGAGGCGCTCTGTCCGGTCCCCTCGATGCCAACGCCGGCTCTGACGGCGGAAGAGTCCATTTCTCGGCTCCATTAAACGGACTTTATGTGAAAAAGAAGAGGAAGAAGGGTATTTCGGCAATTCGGAAGGCTTTTTACCGGAATTTTTCCGAGAAGAAGCGACCGTGGGTGGTGCCGGTGCTGAATTTCGTCGGCCGGAAGGAAGTTCCTGCGGCCGGAGATGGGGGCGACTCGGAGGTGAAGAGTGAGAGCAATGTTCAGTGGGCTTTAGGGAAGGCGGGGGAGGATCGGGTGCATGTGGTTGTATCCGAAGAGCATGGGTGGTTGTTTGTTGGGATTTATGATGGGTTTAACGGCCCTGATGCTCCCGAATTCTTGATGGGTAATCTCTACCGTGCTGTATTTAATGAGCTAGAAGGTTTATTTTGGGATGTTGAGGAAGCCGATCCAATAGTTTCAGGACAAGAATGTTCAAATGTAACTTCAGAAAATGTGGTCATTGTAGAGGAAGCCACCAATCAATCGATGGAGAGCTGTGTTGGAGAGGTTGGAAATGAGTCGAATAATAAGGAAATTGGCGTCGGTCATGAAGATTCAAACCCGCCGCCTACTGATCGAGGATCAGCAAAAAGGGTGACATTTCAACCTGAACCACCAGAGATTAGACGAAGGCGTCTATGGGAATTTCTTGCTGAGGATGATCAGGAAGATGGGCTTGATCTTTCTGGTTCAGACCGATTTGCATTTTCCGTTGATGATGCACTTAGTGTAAACAATGCAGGGTCTGCAGTAAGTAGGCGATGGTTGTTGTTGTCAAAATTGAAGCATGGGTTATCAAAGCATAAGGAGGGCCATGGTCGAAAACTATTTCCATGGAGGTTTGGTTTAGAGGATAAAGAGAAAGTTGAAGTTGATAATAGAGTAGAGGAGACGTCAGGTTCCAGAGGTAGGAAAAGGAAAGTGGGTCCTGTTGATCATGAGTTGGTATTGAAGGCAATGTCTCGGGCCTTAGAATTGACTGAGCTTGCATATTTGGACATGACAGATAAGGTTCTTGATCAGAATCCAGAGCTTGCTCTGATGGGTTCTTGTTTACTGGTTGTGCTCATGAGAGATGAGGATGTGTATGTGATGAATGTTGGTGATAGCCGCGCTCTTGTTGCACAGTATGAAACGCAAGAAGGTAGTTCTAGTGTGGAGTCTAAGGGGGAGGGGAAGAATAGGTCAAACATAGATGATATAGTTGAAGTGTCCACAGATGGCTGTGAGAAAGAAAATAAGGTGGTAAATGAAGATTTTGTTAAAGGGATGCGGTTGACTGCATTGCAATTGTCCACTGATCACAGCACAAGCATTGAAGAAGAAGTCATAAGAATCAAGAATGAACACCCAGATGACAGCCAATGTATAGTCAACGATAGAGTGAAAGGTCGTCTTAAGGTCACCAGAGCATTTGGTGCTGGATTTCTCAAACAGCCCAAATGGAATGATGTTCTATTAGAAATGTTTCGGAATGAGTATATTGGCACTGCACCTTACATATCATGTTCGCCTTCCCTTTGTTATCACCAACTCTGTCCGAGAGATCAGTTTCTGATCCTCTCATCTGATGGGTTATATCAGTATTTAAGCAATCAAGAAGTGGTTTGTGAGGTCGAGAAATTCATGGAGAAGTTTCCTGAAGGAGACCCTGCCCAGCATTTGATAGAGGAGCTTCTTTCCCGTGCTGCAAAGAAAGCTGGGTTGAATTTCCATGAATTGCTGGACATCCCACAAGGAGACCGCCGGAAGTACCATGATGATGTCACTGTCATGGTGATCTCCCTAGAAGGGAGAATTTGGAAATCATCTGGGAAATACCTCTGA 2364 0.4894 MGSGLSQLCPCFVPASRTAVEEPEVVFTASEPLDETLGHSFCYVRSSARFLSPTQSDRFVSPSHSLRFSPSHEPVGRARAGPPETGFKAISGASVSANTSTPRTVLQLENIYDDATDCVGGGVKGSIVNGFESTASFSALPLQPVPRGGEASGPIDRGFFMSGPIERGALSGPLDANAGSDGGRVHFSAPLNGLYVKKKRKKGISAIRKAFYRNFSEKKRPWVVPVLNFVGRKEVPAAGDGGDSEVKSESNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGNLYRAVFNELEGLFWDVEEADPIVSGQECSNVTSENVVIVEEATNQSMESCVGEVGNESNNKEIGVGHEDSNPPPTDRGSAKRVTFQPEPPEIRRRRLWEFLAEDDQEDGLDLSGSDRFAFSVDDALSVNNAGSAVSRRWLLLSKLKHGLSKHKEGHGRKLFPWRFGLEDKEKVEVDNRVEETSGSRGRKRKVGPVDHELVLKAMSRALELTELAYLDMTDKVLDQNPELALMGSCLLVVLMRDEDVYVMNVGDSRALVAQYETQEGSSSVESKGEGKNRSNIDDIVEVSTDGCEKENKVVNEDFVKGMRLTALQLSTDHSTSIEEEVIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVLLEMFRNEYIGTAPYISCSPSLCYHQLCPRDQFLILSSDGLYQYLSNQEVVCEVEKFMEKFPEGDPAQHLIEELLSRAAKKAGLNFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0741 787 CDD PP2Cc 491 775 IPR001932 -
Vvi2g0741 787 MobiDBLite consensus disorder prediction 351 381 - -
Vvi2g0741 787 PANTHER PROTEIN PHOSPHATASE 2C 246 774 IPR015655 GO:0004722|GO:0006470
Vvi2g0741 787 Gene3D - 398 782 IPR036457 -
Vvi2g0741 787 ProSiteProfiles PPM-type phosphatase domain profile. 245 775 IPR001932 -
Vvi2g0741 787 Gene3D - 232 377 IPR036457 -
Vvi2g0741 787 SMART PP2C_4 245 773 IPR001932 -
Vvi2g0741 787 Pfam Protein phosphatase 2C 609 742 IPR001932 -
Vvi2g0741 787 SUPERFAMILY PP2C-like 257 776 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0741 Vvi-Chr2 7063170 7078684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0741 1 787 PP2C-type Phosphatase Gene Family AT2G35350 59.318 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0741 - - vvi:100264235 1563.9