Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0731 ATGCGGGCATGTCTTGCGGTATCCGGAGACGCCATGCACGTACCATCCAGGATAGGCAGATTGGTGTTGCCCATTTTTTTATTTGTGTCCGAAGAGCTTTCAGTTTCAACTCACCTGCACGCCAAGGACTGCATCTTCACCACCCTATACTTTCTCTCTCAATGGTTCTTCTCATTCTTCTTTCCCTTGCTTCACTCTTCTCTTTTCTCACCTTGGTTCATGCTTGAATCTTCGGCGTTTGCGCCAATGGTGCTACTCCGGCAGCCCCCTCCATCTTCGTCACCGCCACCAACTTCTGCCCAATCGCCGGGTACCGGGCCGGAATTATCCCCGTTGTTCTCCGTCGTGTACCCTACTGGAAGAGTGGCTGCTTGTAGAGCTGGTTCAGCTATCCCGCTGTCCACTGATCACAAGCCTGATAGATCTGATGAACGTCAAAGGATTGAAGATGCTGGAGGTTTTGTTATTTGGGCAGGAACCTGGCGGGTTGGTGGTGTTCTTGCTGTTTCTCGTGCATTCGGGGATAAACTTTTTAAGGCATGTGTTATTGCCAATCCAGAAATTCAAGAAGAAGAAATTGATGGTGCAGATTTGATAATTCTTGCAAGTGAGGGACTTTGGAATGTCTTCTCAAATAAGGAGGCCGTGATGGAGATTGAAGCTCTGGGCTCGCCCATTGATGATGGATTTGGGCATGAGTTGGAGCCCAAGCCCATTTGGGTGGGTGAAGAGCCTCATGGCCGCCAGCTTCCCAGCCCAAGTCCACCTCAAGTTAGCCCATTGGGCTTGCCCATGGCACGGATATGGGCTTGGGTTTGA 819 0.5055 MRACLAVSGDAMHVPSRIGRLVLPIFLFVSEELSVSTHLHAKDCIFTTLYFLSQWFFSFFFPLLHSSLFSPWFMLESSAFAPMVLLRQPPPSSSPPPTSAQSPGTGPELSPLFSVVYPTGRVAACRAGSAIPLSTDHKPDRSDERQRIEDAGGFVIWAGTWRVGGVLAVSRAFGDKLFKACVIANPEIQEEEIDGADLIILASEGLWNVFSNKEAVMEIEALGSPIDDGFGHELEPKPIWVGEEPHGRQLPSPSPPQVSPLGLPMARIWAWV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0731 272 CDD PP2Cc 125 216 IPR001932 -
Vvi2g0731 272 PANTHER PROTEIN PHOSPHATASE 121 217 IPR015655 GO:0004722|GO:0006470
Vvi2g0731 272 Gene3D - 120 228 IPR036457 -
Vvi2g0731 272 SMART PP2C_4 15 234 IPR001932 -
Vvi2g0731 272 ProSiteProfiles PPM-type phosphatase domain profile. 1 272 IPR001932 -
Vvi2g0731 272 Pfam Protein phosphatase 2C 125 216 IPR001932 -
Vvi2g0731 272 SUPERFAMILY PP2C-like 121 220 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0731 Vvi-Chr2 6968082 6968987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0731 121 216 PP2C-type Phosphatase Gene Family AT1G43900 76.042 3.36e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0731 K17506 - vvi:100260831 178.718