Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0730 ATGGATGAGCTAATGAGTGGCAATTCAACAATTCCCAACCAAAAGATGAAAGCTTCTGCTAAGAAGACCTTGGATCCGATAACAAATGTATATATCTGGGACATGGATGAGACTCTTATATTGCTCAAATCTTTGTTGAATGGAACATATGCAGAAACTTTCAATGGTCTGAAGGATGTACAAAAGGGTGTAGAAATTGGCAAGATGTGGGAGAAATACATTCTTCAAGTGGCTGATGATATTTTCTTTTATGAACAAATCGAGAACTATAATAAGCCCTTTCTTGATGCCTTGAGCCAGTATGATGATGGGAAGGATCTTTCTGATTATGATTTTAACCATGATGGCTGTAGTTCTCCATATGATGATCTCAACAAAAGAAAACTAGCTTACAGGCATCGTGTTATAGCCCATAAATACAAACAGGGCTTGCATAACACTTTTGATCAGGATATGATAAAACTCTGGGATGATCTCTATGATATGACAGACAGTTATACAGATAAATGGCTCTCCTCAGCACGGGCCTTCTTGGAGCAGTGCTCAGACGAGAACAAAGATTCAACTCCTCTTGCTCCTGCCAATGGGGTTGTTGACTCTATTGATGCAAAATCCCAGAATGTTAATGTTTTAGTGACTTCTGGATCACTGATACCCAGTCTTGTTAAATGCTTACTCTTTCGACTGGACAATCTGATAACACATGGAAATGTTTACAGCTCATGGGAGGTGGGGAAGCTCCAATGTTTTTCATGGATCAAGGAGCGTTTCAGTGGTCCAAATGTCCGCTTTTGTGTAATTGGGGATGGATGGGAAGAGTGTGAGGCAGCACAGACTATGAGATGGCCATTTGTTAAGATTGATCTACGGCCAGGCAGTTCTCACAGATTTCCAGGCCTTACGTTGAGGACAGTAGGCCACTATTTCTCTATCGTGTATGGAATCCCAGATGCTGAAAATGATGATGAGTAG 972 0.4084 MDELMSGNSTIPNQKMKASAKKTLDPITNVYIWDMDETLILLKSLLNGTYAETFNGLKDVQKGVEIGKMWEKYILQVADDIFFYEQIENYNKPFLDALSQYDDGKDLSDYDFNHDGCSSPYDDLNKRKLAYRHRVIAHKYKQGLHNTFDQDMIKLWDDLYDMTDSYTDKWLSSARAFLEQCSDENKDSTPLAPANGVVDSIDAKSQNVNVLVTSGSLIPSLVKCLLFRLDNLITHGNVYSSWEVGKLQCFSWIKERFSGPNVRFCVIGDGWEECEAAQTMRWPFVKIDLRPGSSHRFPGLTLRTVGHYFSIVYGIPDAENDDE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0730 323 PANTHER EYES ABSENT 13 309 IPR028472 GO:0004725
Vvi2g0730 323 Gene3D - 28 295 IPR038102 -
Vvi2g0730 323 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 30 288 - -
Vvi2g0730 323 SFLD Haloacid Dehalogenase 30 288 - -
Vvi2g0730 323 SUPERFAMILY HAD-like 30 288 IPR036412 -
Vvi2g0730 323 FunFam Eyes absent homolog 29 297 - -
Vvi2g0730 323 NCBIfam EYA conserved domain 28 305 IPR006545 GO:0007275
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0730 25 323 Protein tyrosine phosphatase (PTP) family AT2G35320 64.452 2.13e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0730 - K17620 vvi:100247200 674.47