Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0726 ATGTTCATCACCTTCATCCATCAATATCTCTCATACCTATTTTCTCTCTCTAAACCCTCCCATGCATGCCACTACTCTGTTAATACCCATAAACCCACTGCTTATGGCCGATACTCCCCTCATTACCTTCTATCACTCATCCATTCTGCCATTAAGTGCACACCTTCTTTGGTAAAGGCTGCTCACCTTGTTGACAACACCAACCACCAGGGCCACTTCCAAAAGGTGTTGACTGCCATTGGGAACTTCTGTATATACTCCATTGCGTTTGGCATAGTAGTAGAAATGGTGATGATGTACCCAATTCAGAGACGCAAGTACAGGGATGGGATCAATAATCTTTCGGTGTTTCTCATTGGAAGAATACCAATTGCCACGCCAGCAGTGTTGTCAGTGACAATGGCCATAGGCCCTCCCCGGCTGTCAAAGCAAGGTGCTTCCACAAAGAGGATGACAGCAATAGAAGAGATGGCTGGAATGGATTTTCTTTGCAGTGACAAGACTGGGACTCTCACCTTCAATAAGCTTACAGTGGGCAAAAGCATGATGGAGATATTTTCAAAGGACGTGGACAGTGATGTGGTGATTCTGCTTGCGGCTAGGGCTTCCTGGGTTGAGAATCAGGATACCATTGATGCCTGCAGCGTGGGAAGGTTGGCTGACCCCGGTGAAAACAAGATCAGAGACAGTTGGAGGACGCACAGTTGA 708 0.4689 MFITFIHQYLSYLFSLSKPSHACHYSVNTHKPTAYGRYSPHYLLSLIHSAIKCTPSLVKAAHLVDNTNHQGHFQKVLTAIGNFCIYSIAFGIVVEMVMMYPIQRRKYRDGINNLSVFLIGRIPIATPAVLSVTMAIGPPRLSKQGASTKRMTAIEEMAGMDFLCSDKTGTLTFNKLTVGKSMMEIFSKDVDSDVVILLAARASWVENQDTIDACSVGRLADPGENKIRDSWRTHS* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0726 235 PANTHER CALCIUM-TRANSPORTING ATPASE 59 225 - -
Vvi2g0726 235 Gene3D - 176 226 IPR023299 GO:0000166
Vvi2g0726 235 ProSitePatterns E1-E2 ATPases phosphorylation site. 166 172 IPR018303 -
Vvi2g0726 235 Gene3D - 161 175 IPR023214 -
Vvi2g0726 235 SUPERFAMILY Calcium ATPase, transmembrane domain M 64 159 IPR023298 -
Vvi2g0726 235 Gene3D - 68 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0726 Vvi-Chr2 6879277 6879984 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0726 59 226 Primary Pumps ATPases AT1G80660 74.405 2.80e-80 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0726 K01535 - vvi:104877609 319.701