Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0694 ATGGAGTTCTTAGATGAAGAAAGCAGACCAAGATTTGTGTTCCAATCAGGCTCGAACCATTCTCCAGCATCCACGCATCTTCATCCCCAACCCCTTAACAAACCACTCATCTTCATCTCCCTCTCCCTCTCCTCCATCCTCATCTCCCTCTCCGTCTTCTTCCTCCAATCTGAACCCCTCAAATCTCTCCTCCTCTGGTTCGCCCTCTCTCTCCTCGTCGGCCCCTTCGCCCCCTCCCATCTCACCGCCGGCGATATCCGGGTCGGCCGTGGCCCAATCCTCGAATTCCCCTCTCAAGAGAAGGATTCGGATGAGCTCAACAAGAGACCTCCCTCCAATCGGAGACCCAGATTGCGGAAGGTCGAAACGGCGACGTTTACCTCACCGGTGGCAACATCGGTTGAGGGGGATAATGGGCTGGCGAGAGTGGAGAAGAGATCGGAAGCTACGGCGGAGGAGAGCGAGTGGGTTGATGGGGATGTGGAGATTTTGAAGAAGCAGCTGCTGAAGCACCCTGTGGGGATGCCGGGGCGGTGGGAGGCGGTGGCAGAAGCGTTCCGTGGCCGGCACGGGGTGGAGAGCGTGATCCGGAAGGCGAAATCGTTGGGGGAGAGGAAATCAAGCGATTCGGATTCGTTTAATCGGTTCTTGAAGGATCGAAAGCCCGTGGATAAGCGGGTTGAAGATGGAATGGCAATGGAAAACGATGAAAAGGAGGGATGGAGTAGCGGAGAAGACATTGCTTTGCTCAATGCTTTGAAAGCGTTTCCCAAGGATGTGCCGATGAGGTGGGAGAAGATTGCAGCTGCAGTTCCGGGAAGGTCAAAAGCGGCTTGTATGAAGAGATTTTCTGAATTGAAAAAGGGTTTTCGGAACTCCAAGGCTGCTGCTGAGGAGTAA 900 0.5444 MEFLDEESRPRFVFQSGSNHSPASTHLHPQPLNKPLIFISLSLSSILISLSVFFLQSEPLKSLLLWFALSLLVGPFAPSHLTAGDIRVGRGPILEFPSQEKDSDELNKRPPSNRRPRLRKVETATFTSPVATSVEGDNGLARVEKRSEATAEESEWVDGDVEILKKQLLKHPVGMPGRWEAVAEAFRGRHGVESVIRKAKSLGERKSSDSDSFNRFLKDRKPVDKRVEDGMAMENDEKEGWSSGEDIALLNALKAFPKDVPMRWEKIAAAVPGRSKAACMKRFSELKKGFRNSKAAAEE* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0694 299 SMART sant 152 205 IPR001005 -
Vvi2g0694 299 SMART sant 237 289 IPR001005 -
Vvi2g0694 299 MobiDBLite consensus disorder prediction 1 27 - -
Vvi2g0694 299 MobiDBLite consensus disorder prediction 97 116 - -
Vvi2g0694 299 ProSiteProfiles Myb-like domain profile. 233 287 IPR001005 -
Vvi2g0694 299 Gene3D - 233 299 - -
Vvi2g0694 299 MobiDBLite consensus disorder prediction 12 27 - -
Vvi2g0694 299 CDD SANT 241 287 IPR001005 -
Vvi2g0694 299 Gene3D - 148 209 - -
Vvi2g0694 299 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 146 296 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Vvi2g0694 299 SUPERFAMILY Homeodomain-like 238 288 IPR009057 -
Vvi2g0694 299 FunFam Myb family transcription factor 235 295 - -
Vvi2g0694 299 ProSiteProfiles SANT domain profile. 236 291 IPR017884 -
Vvi2g0694 299 Pfam Myb-like DNA-binding domain 240 285 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0694 Vvi-Chr2 6527240 6528139 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vvi2g0694 Myb_DNA-binding 5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0694 - - vvi:100255727 565.459