Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi2g0694 | ATGGAGTTCTTAGATGAAGAAAGCAGACCAAGATTTGTGTTCCAATCAGGCTCGAACCATTCTCCAGCATCCACGCATCTTCATCCCCAACCCCTTAACAAACCACTCATCTTCATCTCCCTCTCCCTCTCCTCCATCCTCATCTCCCTCTCCGTCTTCTTCCTCCAATCTGAACCCCTCAAATCTCTCCTCCTCTGGTTCGCCCTCTCTCTCCTCGTCGGCCCCTTCGCCCCCTCCCATCTCACCGCCGGCGATATCCGGGTCGGCCGTGGCCCAATCCTCGAATTCCCCTCTCAAGAGAAGGATTCGGATGAGCTCAACAAGAGACCTCCCTCCAATCGGAGACCCAGATTGCGGAAGGTCGAAACGGCGACGTTTACCTCACCGGTGGCAACATCGGTTGAGGGGGATAATGGGCTGGCGAGAGTGGAGAAGAGATCGGAAGCTACGGCGGAGGAGAGCGAGTGGGTTGATGGGGATGTGGAGATTTTGAAGAAGCAGCTGCTGAAGCACCCTGTGGGGATGCCGGGGCGGTGGGAGGCGGTGGCAGAAGCGTTCCGTGGCCGGCACGGGGTGGAGAGCGTGATCCGGAAGGCGAAATCGTTGGGGGAGAGGAAATCAAGCGATTCGGATTCGTTTAATCGGTTCTTGAAGGATCGAAAGCCCGTGGATAAGCGGGTTGAAGATGGAATGGCAATGGAAAACGATGAAAAGGAGGGATGGAGTAGCGGAGAAGACATTGCTTTGCTCAATGCTTTGAAAGCGTTTCCCAAGGATGTGCCGATGAGGTGGGAGAAGATTGCAGCTGCAGTTCCGGGAAGGTCAAAAGCGGCTTGTATGAAGAGATTTTCTGAATTGAAAAAGGGTTTTCGGAACTCCAAGGCTGCTGCTGAGGAGTAA | 900 | 0.5444 | MEFLDEESRPRFVFQSGSNHSPASTHLHPQPLNKPLIFISLSLSSILISLSVFFLQSEPLKSLLLWFALSLLVGPFAPSHLTAGDIRVGRGPILEFPSQEKDSDELNKRPPSNRRPRLRKVETATFTSPVATSVEGDNGLARVEKRSEATAEESEWVDGDVEILKKQLLKHPVGMPGRWEAVAEAFRGRHGVESVIRKAKSLGERKSSDSDSFNRFLKDRKPVDKRVEDGMAMENDEKEGWSSGEDIALLNALKAFPKDVPMRWEKIAAAVPGRSKAACMKRFSELKKGFRNSKAAAEE* | 300 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi2g0694 | 299 | SMART | sant | 152 | 205 | IPR001005 | - | |
Vvi2g0694 | 299 | SMART | sant | 237 | 289 | IPR001005 | - | |
Vvi2g0694 | 299 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Vvi2g0694 | 299 | MobiDBLite | consensus disorder prediction | 97 | 116 | - | - | |
Vvi2g0694 | 299 | ProSiteProfiles | Myb-like domain profile. | 233 | 287 | IPR001005 | - | |
Vvi2g0694 | 299 | Gene3D | - | 233 | 299 | - | - | |
Vvi2g0694 | 299 | MobiDBLite | consensus disorder prediction | 12 | 27 | - | - | |
Vvi2g0694 | 299 | CDD | SANT | 241 | 287 | IPR001005 | - | |
Vvi2g0694 | 299 | Gene3D | - | 148 | 209 | - | - | |
Vvi2g0694 | 299 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER 2 | 146 | 296 | IPR044634 | GO:0006450|GO:0030544|GO:0043022|GO:0051083 | |
Vvi2g0694 | 299 | SUPERFAMILY | Homeodomain-like | 238 | 288 | IPR009057 | - | |
Vvi2g0694 | 299 | FunFam | Myb family transcription factor | 235 | 295 | - | - | |
Vvi2g0694 | 299 | ProSiteProfiles | SANT domain profile. | 236 | 291 | IPR017884 | - | |
Vvi2g0694 | 299 | Pfam | Myb-like DNA-binding domain | 240 | 285 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi2g0694 | Vvi-Chr2 | 6527240 | 6528139 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Vvi2g0694 | Myb_DNA-binding | 5e-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi2g0694 | - | - | vvi:100255727 | 565.459 |