Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0630 ATGGTGAAACACTCCATCATGCTTCGTGCTGAGAAGACTGGAAACCCGGTTTTCCTCAATCTCGTTCCTCTTCTCGTGGGTAATGTGGGTCCGATTTTCACGAAGGGTGATTTGAAGGAGGTCGACGAAGAGGTGGCCAAGTACAAGGTTGGAGCTCCTGCCCGTACTGGATTAGTTGCCCATATTGATGTCATTGTCCCACCTGGTAACACTGGACTCAACCTTGCTCACACCCGAGCCTCCGTCAAACCCATCTCTCCAACCTTTTCCCGAGTCTCCATCAAGATGACTCTCCATTACCAGCCTATTAAGGAAGTTGCACTAGGAAACACTCCAATTATTGCTTTCTGTGACACTGATTCTCCAATGCAATGCGTCGCACTATTGCTCCGGGACCACGCCGCCGCTGTTACTGCTCCGGGACCACGCCGCCGCTGCCATAGCCCGCGACAGCGCCGCCATCTTCGCCTGGAAGGGCGAGATCCTCCAGGAGTTGTTCTCGCGCCACCGAGGTCCAAGAGCTGTCCACCAAGCCCGAAGAATCCATGA 549 0.541 MVKHSIMLRAEKTGNPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTGLNLAHTRASVKPISPTFSRVSIKMTLHYQPIKEVALGNTPIIAFCDTDSPMQCVALLLRDHAAAVTAPGPRRRCHSPRQRRHLRLEGRDPPGVVLAPPRSKSCPPSPKNP* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0630 182 FunFam Uncharacterized protein 1 85 - -
Vvi2g0630 182 SUPERFAMILY Ribosomal protein S2 96 128 IPR023591 -
Vvi2g0630 182 MobiDBLite consensus disorder prediction 140 182 - -
Vvi2g0630 182 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 104 - -
Vvi2g0630 182 Gene3D - 84 131 - -
Vvi2g0630 182 Gene3D - 1 83 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0630 Vvi-Chr2 5514083 5514631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0630 1 78 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 71.795 1.90e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0630 K02941 - vvi:100250067 117.857