Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0620 ATGTTATCTTTGTTCCTAAATCATGATCTCTTTCTCTGTTGGCAGGAGAACATCCCTCTTGAAGAAGTTTTTGAGAAATTAAAATGCACAAGAGAAGGTCTCGGCTTGGATGAGGTAGAGAAGCGATTGAAGGTGTTTGGGCACAACAAACTTGAAGAGAAAAAGGAAAATAAGATTATCAAATTTTTGGGATTTATGTGGAATCCTCTCTCATGGGTTATGGAAGCAGCAGCAATCATGGCCATTTCTCTTGCACTTAAAGAGAATAAGGATGTAGATTACATAACCTTTCTTGGCATTCTGGCACTGCATATTATCAATTCAGCCATCAGCTTTGTAGAGGAAAACAAAACTGGCAATGCTGTGGCTCGCCTTATGGCTTGGCTGGCTCCAAAAGCAACGGTTTTACGAGCTGGCAAATGGAGTAAGGAATATGCTTCTGTGTTGGTTCCTGGAGACATTGTCAGTATCAAACCAGGAGATATCATCCCTGCTGATGCACGTTTACTTGAAGGAGATCCTCTGAAAATTGATCAGGTATCTGATCATGTTAAATTCTGA 561 0.4046 MLSLFLNHDLFLCWQENIPLEEVFEKLKCTREGLGLDEVEKRLKVFGHNKLEEKKENKIIKFLGFMWNPLSWVMEAAAIMAISLALKENKDVDYITFLGILALHIINSAISFVEENKTGNAVARLMAWLAPKATVLRAGKWSKEYASVLVPGDIVSIKPGDIIPADARLLEGDPLKIDQVSDHVKF* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0620 186 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 136 IPR023298 -
Vvi2g0620 186 Gene3D - 93 130 - -
Vvi2g0620 186 Gene3D - 131 180 - -
Vvi2g0620 186 Pfam E1-E2 ATPase 129 180 - -
Vvi2g0620 186 Pfam Cation transporter/ATPase, N-terminus 17 80 IPR004014 -
Vvi2g0620 186 SUPERFAMILY Calcium ATPase, transduction domain A 131 179 IPR008250 -
Vvi2g0620 186 SMART Cation_ATPase_N_a_2 13 86 IPR004014 -
Vvi2g0620 186 PANTHER CALCIUM-TRANSPORTING ATPASE 14 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0620 Vvi-Chr2 5395019 5396372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0620 16 179 Primary Pumps ATPases AT3G60330 71.341 3.30e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0620 K01535 - vvi:104882170 326.635