Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0617 ATGGCTCCTTTCACCTCTTTCTTCTCCATCCTCACCTTGTTCTTGTGCTATGCCCCTTTGAAGTACTCCGCCACCATCATTCCGTCAACCAACTCTACAAAGCGCCACCACAAATGGGTTGGACCCTCCGGTCACCTGTTCATCACCGTCGACGCTCGCGGCACCGGTGACTTCTTGTCTGTCCAGGCCGCCGTCGACGCGGTGCCTGATAACAATACCAAGAACGTTCTCATTAAAATCAACGCCGGATGCTACGTAGAGAAGGTGGTGGTGCCGGTGACAAAGCCATACATCACGTTTCAAGGAGACGGGAGGGACGAGACGATGATAGAGTGGCATGATAGAGCAAGTGACCGCGGCACCAATGGCCAACAGCTGCGTACTTATAGAACTGCTTCTGTCATTGTTTTTGCTAATTATTTTTCTGCTAGAAACATCAGCTTCAAGAATACAGCACCGGCACCGATGCCGGGGATGCAGGGATGGCAGGCGGCAGCATTCCGAATATCGGGGGACAAGGCCTACTTCTCTGGCTGCGGTTTCTATGGTGCACAAGACACTCTCTGCGACGACGCCGGACGGCATTATTTCAAGGAGTGTTATATTGAGGGCTCTATAGACTTCATTTTTGGCAATGGTCGCTCCATGTACAAAGACTGCGAACTGCACTCAATAGCCACGAGGTTCGGTTCCATAGCGGCGCAAGATAGGAACTCGCCCGATGAAAAAACCGGGTTCGCATTCGTGGGCTGCAAGGTGACTGGCAGAGGCCCACTCTACGTGGGTCGGGCCATGGGCCAGTTCTCCAGGATAGTCTACTCATACACGTACTTTGATGATGTGGTGGCACATGGGGGGTGGGATGATTGGGACCACACCAGCAACAAGAACAAGACTGTATTTTTCGGAGTGTACAAGTGCTGGGGCCCAGGAGCAGAGGCAGTGAGGGGGGTGACATGGGCCAGAGAGTTAGATTTTGAGACGGCCCATCCATTCCTTGTAAAGAGTTTCGTCAATGGAAGGCACTGGATTGCACCCTCTGATGCTTAG 1050 0.5267 MAPFTSFFSILTLFLCYAPLKYSATIIPSTNSTKRHHKWVGPSGHLFITVDARGTGDFLSVQAAVDAVPDNNTKNVLIKINAGCYVEKVVVPVTKPYITFQGDGRDETMIEWHDRASDRGTNGQQLRTYRTASVIVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPDEKTGFAFVGCKVTGRGPLYVGRAMGQFSRIVYSYTYFDDVVAHGGWDDWDHTSNKNKTVFFGVYKCWGPGAEAVRGVTWARELDFETAHPFLVKSFVNGRHWIAPSDA* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0617 349 FunFam Pectinesterase 43 346 - -
Vvi2g0617 349 Pfam Pectinesterase 48 340 IPR000070 GO:0030599|GO:0042545
Vvi2g0617 349 SUPERFAMILY Pectin lyase-like 47 346 IPR011050 -
Vvi2g0617 349 ProSitePatterns Pectinesterase signature 2. 202 211 IPR033131 -
Vvi2g0617 349 Gene3D - 46 348 IPR012334 -
Vvi2g0617 349 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 45 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0617 Vvi-Chr2 5378602 5380748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0617 7 349 Carbohydrate Esterase AT5G47500 73.864 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0617 - - vvi:100259241 729.169