Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0597 ATGAGAGGTATACCCTTTAATTTTCAGGGGCAGGGAGTGTTGGAGAAGTGGAAAGAAGAAGAGGTTCTTAGCTTTCTGAGCAACGAACCCACCTCTGTTTTGGATACGCGAAGAAGCCCAAGCCCTCCGACATCGACATCCACATCGACGCTGGCTTCGTCTTTCGCCGGAGGAGGAGGAAGTACTGGTAGTGTTGGTGTTGGTGGTGGTGGTTCGGCCGACAACACACCCGGCGTGGCAGCAGGGCCGCTGGTTTCTGACAACTGTCTTCAAAAATGGCCTGTTTCTTTGCCGCTGGAGACCAACCCACCTGATCCCGGCGGCGTTTGTGGTGGTGGTAGCCGGAAGGACGAGTGGGCGGCGGAGCTCCAGCCCATAACGAGTGGACTGGTGGAGCTTGTTGCCGGCGGAGCCGGAGAAGAGAGATGTGGTGGTCTTGGTCTTGGGCTGGAGGATTGGGAGAGCATGTTATCGGAATCGGCAGCCGCTTCGCCGGGCCATGAGCAGTCGCTTCTCGGATGGATCTCCGGCGACGTCGATGACCCGTCATTCGGTCTGAAACATCTCTTGCAGAGTGGAGGAAATCCTCTGGAGTTTGACGGCAATGCCGGGATGGGAATGCTCTATCACAGCGGTGCCGTGTTTGAAGCTTCAGGCGCTCCGGCCACTGGATCACTCAACAACCTTCCTTTACCGGTTTCGTTATCTCCTGGTATGATTTATCAGCAGCAACAGCAACAGCAACAGCTGGAAACCCCTGAAGAAAAGCCTCAGATTTTCAATGCACAACCGGCAATTAATCACCATCAACGGTCCCAAAATCCTAACTATTTTCCGGTACCGCCCTACACCCAACAAGACCAGCACCACCTCCTTCAGCCGCCTCAAGCCAAGCGGCACAACCCTGGCGGTCTGGACCCGAACTCTCAGATGCCAAAAGTCCCTTTTGCTGATCTGGGTCATGAGTTTTTACTCAGAAGACAGCAGCAGCAGCCACTGTGTTTCACTAACCAGCTGCAATTGCTTCCACAACATCAGCTTCAGCAGAAGCCGTTGATGTTGAGCAAGCAGAAGATGGTGGGAGGCGGGGAAGAAATGGCGCCCCAATCCCATCACCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAGGCTTTGCTGGACCAGCTCTGCAAGGCAGCAGAGCTGGTAGGCACTGGGAATTTCTCAATCGCGCAAGGGATATTGGCGCGGCTCAATCATCAGCTCTCCCCGGAAGGAAAGCCGTTTCAGAGGGCTGCTTTCTACTTCAAGGAGGCTTTGCAACTGATCCTTATGAATAACAACCCAGCCGCCTCCCCTCCACTAAGGAGTCCCACACCATTTGACGTCATCTTCAAGATGGGTGCTTACAAGGTGTTCTCTGATGTCTCTCCTCTTATTCAATTTGCAAATTTCACTTGCAACCAAGCCCTCCTGGAAGCTCTTGATGATGCTGACAGAATCCACATTATAGACTTTGATATCGGGTTTGGTGCGCAATGGGCTTCCTTTATGCAGGAGCTTCCTGTGAGGAATAGGGGTGCCCCATCATTGAAAATTACAGCCCTTGCCTCTCCTTCCACCACCCACCATCCCCTGGAGCTCAAGCTTTTGCGTGAAAATCTAACACTATTTGCTGATGAAATTGGAATTGCCTTTGAGCTTCAAGTGGTGAACTTTGATTCCTTCGACCCCGTTTCCTACTCAATGCCTTATTTTCGAACCTCTGAAAATGAGGCAATTGTGGTGAATTTCCCTATCTGGTCCTCTTCCAATCACCCGGCTGCCCTGCCCTTGCTCCTGCGTTTTATAAAGCAGCTCTCACCTAAGCTTATGGTCTCTTTGGATAGAGGTTGTGATCGAGGTGACCTCCCATTGCAGCAACATCTCCTGCATGGCATCCAATCCTACACCAACCTCTTGGAATCTCTTGATGCTACTAATGCGATGACAGACACTGTAAGCAAAATTGAGAGGTTCCTCTTCCAGCCGAGGATAGAAAGCACTACTCTGGGTCGACTCCGTTCCCCCGACAAAATGCCTCCTTGGAAAACACTCTTTGCCTCAGCTGGATTCACACCTGTATCCTTCAGTAACTTCACCGAAAGTCAAGCAGATTGTGTGGTGAAGAGGACACTTGTGAGGGGATTTCATGTTGAGAAGCGTCAGGCATTGCTCATTCTCTGCTGGCAGAATCGGGAGCTCATCTCGGCTTCTGCTTGGAGGTGCTGA 2253 0.5198 MRGIPFNFQGQGVLEKWKEEEVLSFLSNEPTSVLDTRRSPSPPTSTSTSTLASSFAGGGGSTGSVGVGGGGSADNTPGVAAGPLVSDNCLQKWPVSLPLETNPPDPGGVCGGGSRKDEWAAELQPITSGLVELVAGGAGEERCGGLGLGLEDWESMLSESAAASPGHEQSLLGWISGDVDDPSFGLKHLLQSGGNPLEFDGNAGMGMLYHSGAVFEASGAPATGSLNNLPLPVSLSPGMIYQQQQQQQQLETPEEKPQIFNAQPAINHHQRSQNPNYFPVPPYTQQDQHHLLQPPQAKRHNPGGLDPNSQMPKVPFADLGHEFLLRRQQQQPLCFTNQLQLLPQHQLQQKPLMLSKQKMVGGGEEMAPQSHHQQQQQQQQQQQQALLDQLCKAAELVGTGNFSIAQGILARLNHQLSPEGKPFQRAAFYFKEALQLILMNNNPAASPPLRSPTPFDVIFKMGAYKVFSDVSPLIQFANFTCNQALLEALDDADRIHIIDFDIGFGAQWASFMQELPVRNRGAPSLKITALASPSTTHHPLELKLLRENLTLFADEIGIAFELQVVNFDSFDPVSYSMPYFRTSENEAIVVNFPIWSSSNHPAALPLLLRFIKQLSPKLMVSLDRGCDRGDLPLQQHLLHGIQSYTNLLESLDATNAMTDTVSKIERFLFQPRIESTTLGRLRSPDKMPPWKTLFASAGFTPVSFSNFTESQADCVVKRTLVRGFHVEKRQALLILCWQNRELISASAWRC* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0597 750 MobiDBLite consensus disorder prediction 29 60 - -
Vvi2g0597 750 ProSiteProfiles GRAS family profile. 377 749 IPR005202 -
Vvi2g0597 750 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 370 745 IPR005202 -
Vvi2g0597 750 Pfam GRAS domain family 387 749 IPR005202 -
Vvi2g0597 750 MobiDBLite consensus disorder prediction 267 315 - -
Vvi2g0597 750 MobiDBLite consensus disorder prediction 29 74 - -
Vvi2g0597 750 MobiDBLite consensus disorder prediction 359 381 - -
Vvi2g0597 750 MobiDBLite consensus disorder prediction 267 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0597 Vvi-Chr2 5202074 5204512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0597 386 750 GRAS Transcription Factor Family AT4G00150 52.717 6.25e-119 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vvi2g0597 GRAS 3.4e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0597 - - vri:117932952 1107.05