Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0579 ATGGCGGCTCACTGGGTCAAGTCGTTACAGTGCAAATCCAAAGCTTTTGAGGACGTATACCACCCCAATCCCAAGAACCTCATACCCGGTGCTAGTTGCAGAAAGGGTGTTCAGAGCCTTAAAGACGTGATCGAGACGACTAAGCACAAGCCCAGAAAACCCAAGCCCCCGGCGCCGAAGCAGCCCAGTAGTTCCAGACATCAGCGGTCGCCCAAGCCTGAACCGGGTTCTGCTCCAGTGAGCCGGGCTCGTCAGAGTGTGTCTGCTCGGCCTGCGCGACCGGCGGCCCCTTTCTTTCCGGCGCTGGCGGAGATGCCGGAGGGGCACCCTTCGAGGAATGTGGTGGAGATAATCTTCCACACAAGTTGGTCGCCTAAGGCGTTCTCGGGTCGGATCGAGATGATATTCAAGGTGCAGAACTTGCCCAGAACAGTGACCCGCTTCGAGGAGTATCGGGAGATGGTGAAATCTCGGGCGGGTTCTGGCGGTGGCACGTGGGAGGACGACGCGCGATGCGTGGCGGATGGGAACGAGGTGATGAGGTTCCACTGCTTGGGGCCCACCTCCGGAGGGGTCTACGACGGCGGCGCTGCCGCATGGGTGTTTCCGGGAGGGAAGGGCTCGGCCATTTGCACATTTTCCGGCAGCGGCGGGGCCCACGAGAGCGGCGGTGGTGGGAGAGGTCGGAGGGCCATGTTGGTTTGCCGGGTCATAGCAGGCCGGGTCTCGAAGCAAATCGGATTGGACTCGTTGTTGGAGGGCCGAGTCGGTTTTGACTCGGTGAGTGGGGATAATGGCGAGTTACTAGTGTTTGATCCTCGTGCAGTGTTACCATGCTTTCTTATCATCTATAAATTGTAA 861 0.59 MAAHWVKSLQCKSKAFEDVYHPNPKNLIPGASCRKGVQSLKDVIETTKHKPRKPKPPAPKQPSSSRHQRSPKPEPGSAPVSRARQSVSARPARPAAPFFPALAEMPEGHPSRNVVEIIFHTSWSPKAFSGRIEMIFKVQNLPRTVTRFEEYREMVKSRAGSGGGTWEDDARCVADGNEVMRFHCLGPTSGGVYDGGAAAWVFPGGKGSAICTFSGSGGAHESGGGGRGRRAMLVCRVIAGRVSKQIGLDSLLEGRVGFDSVSGDNGELLVFDPRAVLPCFLIIYKL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0579 286 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 8 284 - -
Vvi2g0579 286 MobiDBLite consensus disorder prediction 39 92 - -
Vvi2g0579 286 Gene3D - 100 285 - -
Vvi2g0579 286 SUPERFAMILY ADP-ribosylation 102 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0579 Vvi-Chr2 5025265 5026125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0579 101 286 C2H2 Transcription Factor Family AT2G29660 39.035 6.87e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0579 - - vvi:100257409 502.286