Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0572 ATGGTTGGTTTTGGTTGTGATATTCCTCACTGGCTTGAAATTCTTCTGGGGGAGAAGTTCTTTAACGCGTGTGTGGTTCATGAGTGCGCTAAGAAGAACGAGAAGAACATCTTTTGCTTGGACTGTTGCACCAGTATCTGCCCCCACTGTTTGCTCCCTCACCGCCATCACCGCCTTCTACAGATAAGGAGGTACGTTTATCACGACGTTATACGGTTGGATGATGCTCAAAAGCTGATGGATTGTTCTCTTGTTCAATCATACACAACAAACAGTGCAAAAGTGGTGTTTTTGAACCAAAGGCCTATGTCTCGGCCTTTTAGAGGGTCCGGCAACCTCTGCTACACCTGCGACCGAAGCTTGCAAGACCCATATCTCTTCTGCTCTCTCGCATGCAAGGTTCGATTTGCCTTGAAATTTATCATTAACCTTCTTCGTTTTCTCCATCTGGCACGAGGCGAGGCCTTTTCCGAGCTCGACGACCGCCAAATGACCCCAGAATCCGTCCTCGACTCCCCTGTTTCTCTCCGAACTTCGTCTGGCTCGAGCTCCACCGGCGGTGCCGTGAGTTGCAGAGCGCTGGCCTGCACTGCAACCACCGAGTTCGTGAAGAAAAAGCGCAGCAGCGTCTCTGTGCCTCGGTTCCCTTTCCGTCCAATCCTCTCACCGACGTCAGACAACGCCGGTGGAATAAACAGGAGAAAGGGTGTCCCTCACCGATCGCCGCTGCACTGA 735 0.517 MVGFGCDIPHWLEILLGEKFFNACVVHECAKKNEKNIFCLDCCTSICPHCLLPHRHHRLLQIRRYVYHDVIRLDDAQKLMDCSLVQSYTTNSAKVVFLNQRPMSRPFRGSGNLCYTCDRSLQDPYLFCSLACKVRFALKFIINLLRFLHLARGEAFSELDDRQMTPESVLDSPVSLRTSSGSSSTGGAVSCRALACTATTEFVKKKRSSVSVPRFPFRPILSPTSDNAGGINRRKGVPHRSPLH* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0572 244 MobiDBLite consensus disorder prediction 221 244 - -
Vvi2g0572 244 ProSiteProfiles Zinc finger B-box type profile. 24 73 IPR000315 GO:0008270
Vvi2g0572 244 CDD Bbox2 24 62 - -
Vvi2g0572 244 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 243 - -
Vvi2g0572 244 Pfam PLATZ transcription factor 63 134 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0572 Vvi-Chr2 4949418 4950534 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vvi2g0572 PLATZ 1.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0572 - - vvi:100852507 427.943