Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0520 ATGGACGTTAGAGGAAAGGTAGTTGTTTGTGACACAGAAGATGGGGCAATATACGTCTCTGATAAAGAAGAAGAAGTGAAAAATGCCGGCGGTGTTGCCATCATTCTTCCAAATAACAAATATCGCGGCTTCAGTACGAGCGAAATTAATGCTGATATTCTTCCTGCAACACATTTGAGCTACTCATCAGGTTTGAAGATCAAGGCTTATATAAATTCAACAACAAAGCCTACAGCTACAATTGAATTTAAAGGAACCATCATTGGAATCTCGTCTGCTCCTGAAGTGGCTCACTTTTCTTCCAGAGGACCTAGCTTGACCAGTCCGGGTATTTTAAAACCAGATATTATCGGCCCCGGAGCAAATATTCTTGCTGCATGGCCTGCAAATCGCATGAACAGTAGCTCATTTAACATAGTTTCAGGCACATCTCTATCATGCCCCCATCTCAGCGGCGTCGCAGCTTTGCTAAAAAGCACTCATCCTGAATGGTCACCTGCTGCCATTAAGTCCGCAATCATGACTACTGCAGATGAGGTAAACCATGAAAACAAACCCATTATGGATCAAACACATCAGCCTGCTGACATTTTCGCTGTGGGTGCCGGACATGTGAACCCATCAAGAGCAAACGATCCTGGACTCATTTACGACATCCAACCAGAAGATTACATACACTATCTCTGTGGTTTGGGTTACAGTGACTCTCAGGTAGGAATTGTTGTGAATCGGAGGGTGAACTGCTCTGAAGAATCAACCATCCCAGAAGCACAACTGAATTATCCTTCGTCTTCTATTGCTCTGGGGTCTAGTACTACTACTCAGGAGTTCACCAGAACAGCCACAAATGTTGGTGCAGTTGATTCAACTTACATAATCGAAATTTTTGCACCACCAGGAGTCAATGTGAGTGTGAAACCAGACAAGCTTGACTTCACCAGGCTGAACCAGAAGAAGACATATGCAGTTATGTTCAGCAAAATAAGGGCCAAGGGGAAAAATAGAAAGCCACATGCACAAGGGTTTTTAAGATGGGTTTCTGCTAAACATTCTGTCAGAAGCCCCATATCTGTTAAGTTTGAATGA 1086 0.4337 MDVRGKVVVCDTEDGAIYVSDKEEEVKNAGGVAIILPNNKYRGFSTSEINADILPATHLSYSSGLKIKAYINSTTKPTATIEFKGTIIGISSAPEVAHFSSRGPSLTSPGILKPDIIGPGANILAAWPANRMNSSSFNIVSGTSLSCPHLSGVAALLKSTHPEWSPAAIKSAIMTTADEVNHENKPIMDQTHQPADIFAVGAGHVNPSRANDPGLIYDIQPEDYIHYLCGLGYSDSQVGIVVNRRVNCSEESTIPEAQLNYPSSSIALGSSTTTQEFTRTATNVGAVDSTYIIEIFAPPGVNVSVKPDKLDFTRLNQKKTYAVMFSKIRAKGKNRKPHAQGFLRWVSAKHSVRSPISVKFE* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0520 361 SUPERFAMILY Subtilisin-like 90 215 IPR036852 GO:0004252|GO:0006508
Vvi2g0520 361 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 358 IPR045051 -
Vvi2g0520 361 Pfam PA domain 2 66 IPR003137 -
Vvi2g0520 361 CDD PA_subtilisin_like 2 81 - -
Vvi2g0520 361 Pfam Fibronectin type-III domain 258 358 IPR041469 -
Vvi2g0520 361 Gene3D Peptidase S8/S53 domain 89 224 IPR036852 GO:0004252|GO:0006508
Vvi2g0520 361 Gene3D - 228 360 - -
Vvi2g0520 361 Pfam Subtilase family 87 180 IPR000209 GO:0006508|GO:0008236
Vvi2g0520 361 Gene3D - 2 88 - -
Vvi2g0520 361 ProSiteProfiles Serine proteases, subtilase domain profile. 1 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0520 Vvi-Chr2 4454773 4455858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0520 2 361 Subtilisin-like Serine Gene Family AT1G04110 47.074 3.26e-105 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0520 - - vvi:100242816 483.796