Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0511 ATGGAGGAAGCTGGGAAACCCAACTTGGTAGATTATTTTCCGGTGCTCAGACGGATTGATCCACAAGGTATAAGGCGTCGTTTGACAGTTTATTTTGGAAGGATGATTGAGATCTTTGATAGAATGATCAAGCAACGGTTACAGCTAAGAAAAATTCAAGGTTCAATAGCTAGCAGTGATGTGTTAGACGTTCTTCTCAACATAAGTGAAGATAACAGCAATGAGATTGAAAGAAGTCATATGGAACATTTGTTATTGGACTTATTTGTTGCGGGGACTGACACAACTTCGAGAACATTGGAATGGGCAATAGCAGAGCTGCTACACAACCCTGAAAAACTTTTGAAATCCCGAATGGAACTCCTGCAAACCATCGGCCAAGACAAACAGGTTAAAGAATCAGACATCACTCGACTCCCTTACGTGCAAGCGGTGGTGAAAGAAACCTTCCGATTGCACCCAGCAGTTCCATTTTTACTCCCACGCAGAGTTGAAGAGGACACAGATATAGAAGGGTTCACAGTCCCAAAGAATGCACAGGTGCTGGTGAACGCATGGGCTATAGGTCGAGACCCGAACACATGGGAGAACCCCAACTCATTTGTGCCAGAGAGGTTCTTGGGGTTGGACATATGGACGTGA 642 0.4455 MEEAGKPNLVDYFPVLRRIDPQGIRRRLTVYFGRMIEIFDRMIKQRLQLRKIQGSIASSDVLDVLLNISEDNSNEIERSHMEHLLLDLFVAGTDTTSRTLEWAIAELLHNPEKLLKSRMELLQTIGQDKQVKESDITRLPYVQAVVKETFRLHPAVPFLLPRRVEEDTDIEGFTVPKNAQVLVNAWAIGRDPNTWENPNSFVPERFLGLDIWT* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0511 213 PRINTS E-class P450 group I signature 184 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0511 213 PRINTS E-class P450 group I signature 143 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0511 213 PRINTS E-class P450 group I signature 80 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0511 213 PRINTS E-class P450 group I signature 100 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0511 213 FunFam Geraniol 8-hydroxylase 32 213 - -
Vvi2g0511 213 SUPERFAMILY Cytochrome P450 4 208 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0511 213 PRINTS P450 superfamily signature 144 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0511 213 PRINTS P450 superfamily signature 91 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0511 213 Pfam Cytochrome P450 6 207 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0511 213 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 210 - -
Vvi2g0511 213 Gene3D Cytochrome P450 1 211 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0511 Vvi-Chr2 4403949 4404744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0511 1 211 Cytochrome P450 AT1G33730 50.000 5.99e-75 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0511 - - vvi:109124258 400.979