Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0509 ATGGAGTTGTTGAGTTGTCTGCTGTGTTTTCTTGCTGCTTGGACTTCAATTTACATCATGTTTTCAGCCAGAAGAGGAAGAAAGCATGCTGCTCACAAACTTCCTCCAGGACCAGTTCCGCTTCCCATAATAGGAAGCCTCTTAAACCTGGGTAACAGACCCCATGAGTCCCTCGCCAATCTTGCAAAAACTTACGGCCCAATTATGACTCTCAAACTTGGCTATGTAACCACAATAGTCATCTCTTCTGCCCCCATGGCCAAAGAAGTCCTCCAAAAGCAGGATCTCTCCTTCTGCAACCGATCCATCCCTGATGCCATCCGAGCCGCAAAACACAACCAACTGTCGATGGCCTGGCTACCTGTTTCAACAACTTGGAGAGCCCTTCGAAGGACATGCAATTCGCACTTATTCACTCCTCAAAAACTAGACTCTAACACCCATCTCCGCCACCAGAAAGTGCAAGAGCTTCTTGCGAATGTTGAACAGAGCTGCCAAGCTGGTGGTCCTGTAGATATAGGCCAAGAAGCTTTTAGAACTAGTCTCAACTTGTTATCCAACACCATATTTTCTGTGGATCTTGTTGATCCAATTTCTGAGACTGCACAAGAGTTTAAAGAGTTGGTGCGTGGTGTGATGGAGGAAGCTGGGAAACCCAACTTGGTAGATTATTTTCCGGTGCTCAGACGGATTGATCCACAAAGTATAAGGCGTCGTTTGACAATTTATTTTGGAAGGATGATTGAGATCTTTGATAGAATGATCAAGCAACGGTTACAGCTAAGAAAAAATCAAGGTTCAATAGCTAGCAGTGATGTGTTAGACGTTCTTCTCAACATCAGTGAAGATAACAGCAGTGAGATTGAAAGAAGTCATATGGAACATTTGTTATTGGACTTATTTGCTGCGGGGACTGACACAACTTCGAGCACATTGGAATGGGCAATGGCAGAGCTGCTACACAACCCTGAAACACTTTTGAAAGCCCGAATGGAACTCCTGCAAACCATCGGCCAAGACAAACAGGTAAAAGAATCAGACATCAGTCGACTCCCATACTTGCAAGCAGTGGTGAAAGAGACCTTCCGATTGCACCCAGCAGTTCCATTTTTACTCCCACGCAGAGTTGAAGGGGACGCAGATATAGATGGGTTCGCAGTCCCAAAGAACGCACAGGTGCTGGTGAACGCATGGGCTATAGGTCGAGACCCGAACACATGGGAGAACCCCAACTCATTTGTGCCAGAGAGGTTCTTGGGGTTGGACATGGACGTGAAGGGCCAGAATTTTGAGCTGATTCCGTTTGGTGCTGGCAGGAGAATCTGTCCTGGGCTGCCATTGGCAATCCGGATGGTTCACTTGATGCTGGCCTCGCTCATTCACTCCTATGATTGGAAACTTGAAGATGGGGTGACACCGGAAAACATGAACATGGAAGAAAGATATGGCATTAGTTTACAAAAGGCTCAGCCCCTGCAAGCTCTACCTGTACGGGTTTGA 1500 0.4667 MELLSCLLCFLAAWTSIYIMFSARRGRKHAAHKLPPGPVPLPIIGSLLNLGNRPHESLANLAKTYGPIMTLKLGYVTTIVISSAPMAKEVLQKQDLSFCNRSIPDAIRAAKHNQLSMAWLPVSTTWRALRRTCNSHLFTPQKLDSNTHLRHQKVQELLANVEQSCQAGGPVDIGQEAFRTSLNLLSNTIFSVDLVDPISETAQEFKELVRGVMEEAGKPNLVDYFPVLRRIDPQSIRRRLTIYFGRMIEIFDRMIKQRLQLRKNQGSIASSDVLDVLLNISEDNSSEIERSHMEHLLLDLFAAGTDTTSSTLEWAMAELLHNPETLLKARMELLQTIGQDKQVKESDISRLPYLQAVVKETFRLHPAVPFLLPRRVEGDADIDGFAVPKNAQVLVNAWAIGRDPNTWENPNSFVPERFLGLDMDVKGQNFELIPFGAGRRICPGLPLAIRMVHLMLASLIHSYDWKLEDGVTPENMNMEERYGISLQKAQPLQALPVRV* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0509 499 Gene3D Cytochrome P450 19 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 Pfam Cytochrome P450 35 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vvi2g0509 499 CDD CYP76-like 62 496 - -
Vvi2g0509 499 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 FunFam Cytochrome P450 76C4 26 495 - -
Vvi2g0509 499 SUPERFAMILY Cytochrome P450 35 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0509 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 14 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0509 Vvi-Chr2 4399412 4401065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0509 2 498 Cytochrome P450 AT2G45550 48.104 1.24e-173 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0509 - K23810 vvi:100232891 973