Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0507 ATGGAACTCCTGCAAACCATCGGCCAAGACAAACAGGTTAAAGAATCAGACATCACTCGACTCCCTTACGTGCAAGCGGTGGTGAAAGAAACCTTCCGATTGCACCCAGCAGTTCCATTTTTACTCCCACGCAGAGTTGAAGAGGACACAGATATACAAGGGTTCACAGTCCCAAAGAACGCACAGGTGCTGGTGAACGCATGGGCTATAGGTCGAGACCCGAACACATGGGAGAACCCCAACTCATTTGTGCCAGAGAGGTTCTTGGGGTTGGACATGGACGTGAAGGGCCAGAATTTTGAGCTGATTCCGTTTGGTGCTGGCAGGAGAATCTGTCCTGGGCTGCCATTGGCAATCCGGATGGTTCACTTGATGCTGGCCTCGCTCATTCACTCCTATGATTGGAAACTTGAAGATGGGGTGACACCGGAAAACATGAACATGGAAGAAAGTTTTGGACTTTCCTTACAGAAGGCTCAGCCCCTGCAAGCTCTACCTGTACGGGTTTGA 510 0.5039 MELLQTIGQDKQVKESDITRLPYVQAVVKETFRLHPAVPFLLPRRVEEDTDIQGFTVPKNAQVLVNAWAIGRDPNTWENPNSFVPERFLGLDMDVKGQNFELIPFGAGRRICPGLPLAIRMVHLMLASLIHSYDWKLEDGVTPENMNMEESFGLSLQKAQPLQALPVRV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0507 169 SUPERFAMILY Cytochrome P450 2 166 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0507 169 Pfam Cytochrome P450 2 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0507 169 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 105 114 IPR017972 GO:0005506|GO:0016705
Vvi2g0507 169 PRINTS P450 superfamily signature 112 123 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0507 169 PRINTS P450 superfamily signature 26 37 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0507 169 PRINTS P450 superfamily signature 103 112 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0507 169 FunFam Os10g0167200 protein 1 165 - -
Vvi2g0507 169 PRINTS E-class P450 group I signature 66 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0507 169 PRINTS E-class P450 group I signature 112 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0507 169 PRINTS E-class P450 group I signature 102 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0507 169 PRINTS E-class P450 group I signature 25 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0507 169 Gene3D Cytochrome P450 1 165 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0507 169 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0507 Vvi-Chr2 4395605 4396114 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0507 2 164 Cytochrome P450 AT1G33730 65.031 2.33e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0507 - - vvi:109124258 345.125