Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0501 ATGCCACCCCCACCTGCTAAATGGACTGGGTTGTGTGAATTCAACAAGTCCGGCGGCTGCAGTAACAAGGTCATTGGTGCAAGAAATTTTGAAAGCGGGAGTAAAGGAATGCCACCATTTGATGAAGGGGGCCACGGCAGCCACACGGCAAGCATTGCTGCTGGAAATTTTGTGAAACACGCCAATGTTCTTGGGAATGCCAAGGGCACCGCCGCTGGCGTTGCGCCTGGTGCTCACTTAGCGATTTATAAAATATGCACCGACGAGGGCTGTGCCGGAGCTGATATATTAGCTGCATTTGATGCTGCCATTGCCGATGGTGTTGATGTGCTTTCCGTTTCCGTAGGTCAAAAATCTACTCCTTTCTATGACGACGCAATTGCCGTCGGTGCTTTTGCGGCAATTCGAAAGGGGATTTTGGTGAGCTGTTCTGCTGGGAATTATGGTCCAACCAGTGCTTCGGTTGGCAATGCCGCACCATGGATTCTTACTGTGGGTGCGAGCACCATTGACAGAAGCATAAGGGCTTCTGTGAAGCTTGGGAACGGGGAGAAATTTGATGGGGAATCACTTTTCCAGCCTAGCGATTATCCTCCAGAATTTTTCCCTCTTGTATACTCACCTTATTTTTGCAGTGCAGGAACAGTGAACGTGGCTGACGTTGAAGGAAAGGTAGTTCTTTGTGACTCAGATGGGAAAACAAGCATAACAGACAAAGGGCGAGTCGTGAAACAAGCTGGTGGTGTTGCCATGATTGTAGCCAATAGCGATCTTGCTGGCTCAACTACGATTGCATTGGAGCACGTTCTTCCGGCATCCCACGTGAGCTATTCTGCAGGTTTGAGTATCAAAGCCTATATAAGTTCAACATCACACCCTACAGCTTCAATCGCATTTGAGGGGACTATCATTGGAGAGCCATCAGCTCCGGAGGTTATTTTCTTCTCTGCAAGAGGACCAAGCTTGGCAACCCCCGGGATTTTGAAACCGGACATTATTGGTCCTGGAATGAACATTCTAGCAGCATGGCCTACTCCTTTACACAACAACAGCCCCTCAAAATTGACATTCAACCTGTTATCCGGTACATCGATGTCCTGCCCCCATCTCAGCGGTGTCGCAGCTTTGATCAAAAGCTCTCATCCTGACTGGTCACCCGCTGCAATCAAGTCTGCAATCATGACTACTGCAGATATACTGAACCTTAAAGATTCGCCCATTTTAGATCAAACCGAACATCCTGCTAGTATCTTTGCTATTGGTGCTGGCCATGTCAACCCATTAAGGGCAAATGACCCGGGACTCATTTATGACATTCAACCCGATGACTACATACCCTACTTATGCGGTTTAGGTTACAATGACACGCAAGTAGGACTTATTACGCTGCGCACTGTGAGATGCTCCGAGGAGTCAAGCATACCTGAAGCACAACTCAACTATCCTTCATTTTCTATTGCACTGAGATCTAAGGCCCGAAGGTTTCAGAGGACAGTCACAAATGTAGGCAAGCCAACGTCATCTTACACCGTTCACATTGCCGCACCACCAGGAGTTGATGTCACTGTGAAGCCACATAAGCTCCATTTCACCAAAAGGAACCAGAAGAAGACATATACGGTGACCTTTAAGAGGAGTAGCTCCGGGGTTATCACAGGCGAGCAATATGCTCAAGGGTTCCTAAAATGGGTTTCTGCTACACACTCTGCTAGAAGCCCCATAGCTGTTAAGTTTGAATGA 1740 0.4793 MPPPPAKWTGLCEFNKSGGCSNKVIGARNFESGSKGMPPFDEGGHGSHTASIAAGNFVKHANVLGNAKGTAAGVAPGAHLAIYKICTDEGCAGADILAAFDAAIADGVDVLSVSVGQKSTPFYDDAIAVGAFAAIRKGILVSCSAGNYGPTSASVGNAAPWILTVGASTIDRSIRASVKLGNGEKFDGESLFQPSDYPPEFFPLVYSPYFCSAGTVNVADVEGKVVLCDSDGKTSITDKGRVVKQAGGVAMIVANSDLAGSTTIALEHVLPASHVSYSAGLSIKAYISSTSHPTASIAFEGTIIGEPSAPEVIFFSARGPSLATPGILKPDIIGPGMNILAAWPTPLHNNSPSKLTFNLLSGTSMSCPHLSGVAALIKSSHPDWSPAAIKSAIMTTADILNLKDSPILDQTEHPASIFAIGAGHVNPLRANDPGLIYDIQPDDYIPYLCGLGYNDTQVGLITLRTVRCSEESSIPEAQLNYPSFSIALRSKARRFQRTVTNVGKPTSSYTVHIAAPPGVDVTVKPHKLHFTKRNQKKTYTVTFKRSSSGVITGEQYAQGFLKWVSATHSARSPIAVKFE* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0501 579 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 576 IPR045051 -
Vvi2g0501 579 Pfam Subtilase family 40 409 IPR000209 GO:0006508|GO:0008236
Vvi2g0501 579 Pfam PA domain 203 282 IPR003137 -
Vvi2g0501 579 SUPERFAMILY Subtilisin-like 35 435 IPR036852 GO:0004252|GO:0006508
Vvi2g0501 579 ProSiteProfiles Serine proteases, subtilase domain profile. 1 431 - -
Vvi2g0501 579 PRINTS Subtilisin serine protease family (S8) signature 361 377 IPR015500 -
Vvi2g0501 579 PRINTS Subtilisin serine protease family (S8) signature 41 54 IPR015500 -
Vvi2g0501 579 Pfam Fibronectin type-III domain 478 576 IPR041469 -
Vvi2g0501 579 Gene3D - 448 578 - -
Vvi2g0501 579 Gene3D Peptidase S8/S53 domain 1 444 IPR036852 GO:0004252|GO:0006508
Vvi2g0501 579 FunFam Subtilisin-like protease SBT1.5 448 579 - -
Vvi2g0501 579 CDD PA_subtilisin_like 177 297 - -
Vvi2g0501 579 Gene3D - 171 304 - -
Vvi2g0501 579 FunFam subtilisin-like protease SBT1.5 171 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0501 Vvi-Chr2 4354053 4355792 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0501 1 579 Subtilisin-like Serine Gene Family AT1G04110 45.057 1.63e-170 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0501 - - vvi:100263349 1148.65