Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0500 ATGGAATTTTTCTTCCTTTTCGCTCTCTTTTTCATGTGTGAGATCTCCGGTAGCGTCGCTTTTCAACAGATAGCGGCAGAAAAGAGCATGTTAAAGACTTATATTGTCCACGTAAATGACCCCGTGGGTAAATTTTCTGCACAATCGGAGGCTTTGGAGAGCTGGTACCAGTCCTTTTTGCCGGCCAGCACTGAATCCGAAAATCAACAGCAGCGTTTGCTTTATTCATATCGGCATGTGATTAGTGGGTTTGCAGCGAGATTGACGGAGGAGGAGGTTAAAGCAATGGAAAAGAAGGATGGGTTTGTTTCGGCCACGCCAGAAAAAATTTACCATTTGCATACAACTCGCACCCCTGGTTTCTTGGGATTGCACAATAGGTCGGGGTTCTGGAAAGGATCCAACTTCGGTGAAGGGGTCATTATTGGAATATTGGACACAGGAGTATATCCACAACACCCTTCATTTAGTGACGAAGGAATGCCGCTCCCACCTGCTAAATGGACGGGAACCTGTGAATTCAACGGGACGGCCTGCAACAACAAGCTCATCGGTGCCAGGAATTTTGACAGTCTGACCCCGAAACAGCTACCTATTGATGAAGAGGGCCATGGCACCCACACGGCAAGCACTGCCGCGGGAAATTATGTGAAGCACGCCAATATGTATGGGAATGCCAAAGGCACTGCTGCTGGTATTGCACCTCGTGCTCATGTGGCAGTATATAAAGTATGTGGTTTATTGGGCTGCGGCGGAAGTGATATTTTAGCCGCATATGACGCTGCCATTGAAGACGGTGTTGATGTGCTTTCTCTCTCCCTCGGTGGAGAGTCTTCTCCTTTCTACGATGACCCGGTTGCTCTGGGTGCCTTTGCTGCAATTAGGAAGGGAATTTTTGTTAGCTGTTCTGCTGGGAATAGTGGGCCAGCCCATTTTACACTCTCAAATGAGGCACCATGGATTCTCACCGTAGCTGCAAGCACCCTGGATAGAAGCATAACCGCGACAGCAAAGCTTGGAAACACGGAGGAATTTGATGGGGAATCGCTTTACCAGCCAAGAAATTTTTCTTCCAAACTATTGCCTCTTGTATATGCCGGGGCGAATGGTAACCAAACATCTGCTTATTGTGCGCCGGGATCCTTGAAAAACCTTGATGTCAAAGGAAAGGTAGTTGTTTGTGATAGAGGTGGAGATATAGGCAGAACTGAAAAAGGGGTGGAAGTGAAGAATGCTGGTGGTGCTGCCATGATCCTGGCCAATAGCATTAATGATAGCTTCAGTACATTTGCCGACCCTCACGTTCTTCCTGCAACACATGTGAGTTACGCAGCGGGTTTGAAGATCAAAGCTTACACGAAATCAACATCAAACCCTTCAGCTACAATCCTATTCAAGGGTACAAATGTCGGAGTCACATCTGCTCCTCAAATCACGTCCTTTTCCTCAAGAGGACCCAGCATTGCATCCCCGGGCATTTTGAAACCCGACATTACCGGACCTGGTGTGAGCATTCTAGCAGCATGGCCGGCCCCTCTCTTGAACGTCACTGGCTCAAAAAGCACATTCAACATGATTTCTGGCACATCAATGTCGTGCCCTCATCTTAGCGGTGTCGCAGCTTTGCTCAAAAGCGCCCATCCTAACTGGTCACCTGCTGCCATTAAGTCTGCAATCTTGACTACTGCTGATACACTAAATTTGAAAGACGAGCCCATTTTAGATGATAAACATATGCCTGCCGACCTATTTGCAATCGGTGCTGGTCATGTCAATCCATCAAAAGCAAATGATCCCGGACTCATTTACGACATCGAACCTTATGATTACATACCCTACTTGTGCGGTTTGGGTTACACTAATGCTCAGGTAGAAGCTATTGTATTGCGCAAGGTGAACTGCTCTAAGGAATCAAGTATACCTGAGGCAGAGCTAAATTATCCTTCATTTTCAATTGCTTTGGGCTCCAAGGATTTGAAATTTAAGAGGGTTGTCACGAATGTAGGCAAGCCTCACTCGTCTTACGCTGTGAGTATCAATGCACCAGAAGGAGTCGATGTGGTGGTTAAGCCTACTAAGATCCATTTCAACAAAGTGTACCAGAAGAAATCGTACACAGTCATCTTTAGGAGTATAGGCGGGGTTGATTCTAGGAACCGATATGCGCAAGGATTTCTCAAATGGGTCTCTGCCACACACTCTGCCAAAAGTCCAATATCTGTTACGTTTGAATGA 2235 0.4667 MEFFFLFALFFMCEISGSVAFQQIAAEKSMLKTYIVHVNDPVGKFSAQSEALESWYQSFLPASTESENQQQRLLYSYRHVISGFAARLTEEEVKAMEKKDGFVSATPEKIYHLHTTRTPGFLGLHNRSGFWKGSNFGEGVIIGILDTGVYPQHPSFSDEGMPLPPAKWTGTCEFNGTACNNKLIGARNFDSLTPKQLPIDEEGHGTHTASTAAGNYVKHANMYGNAKGTAAGIAPRAHVAVYKVCGLLGCGGSDILAAYDAAIEDGVDVLSLSLGGESSPFYDDPVALGAFAAIRKGIFVSCSAGNSGPAHFTLSNEAPWILTVAASTLDRSITATAKLGNTEEFDGESLYQPRNFSSKLLPLVYAGANGNQTSAYCAPGSLKNLDVKGKVVVCDRGGDIGRTEKGVEVKNAGGAAMILANSINDSFSTFADPHVLPATHVSYAAGLKIKAYTKSTSNPSATILFKGTNVGVTSAPQITSFSSRGPSIASPGILKPDITGPGVSILAAWPAPLLNVTGSKSTFNMISGTSMSCPHLSGVAALLKSAHPNWSPAAIKSAILTTADTLNLKDEPILDDKHMPADLFAIGAGHVNPSKANDPGLIYDIEPYDYIPYLCGLGYTNAQVEAIVLRKVNCSKESSIPEAELNYPSFSIALGSKDLKFKRVVTNVGKPHSSYAVSINAPEGVDVVVKPTKIHFNKVYQKKSYTVIFRSIGGVDSRNRYAQGFLKWVSATHSAKSPISVTFE* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0500 744 CDD Peptidases_S8_3 111 564 IPR034197 -
Vvi2g0500 744 Pfam Subtilase family 137 566 IPR000209 GO:0006508|GO:0008236
Vvi2g0500 744 CDD PA_subtilisin_like 336 463 - -
Vvi2g0500 744 Pfam PA domain 362 449 IPR003137 -
Vvi2g0500 744 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 114 IPR037045 -
Vvi2g0500 744 ProSiteProfiles Serine proteases, subtilase domain profile. 110 597 - -
Vvi2g0500 744 FunFam Subtilisin-like protease SBT1.5 139 340 - -
Vvi2g0500 744 SUPERFAMILY Subtilisin-like 113 601 IPR036852 GO:0004252|GO:0006508
Vvi2g0500 744 FunFam subtilisin-like protease SBT1.5 330 470 - -
Vvi2g0500 744 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Vvi2g0500 744 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Vvi2g0500 744 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Vvi2g0500 744 Pfam Fibronectin type-III domain 644 741 IPR041469 -
Vvi2g0500 744 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 142 153 IPR023827 -
Vvi2g0500 744 Gene3D - 330 471 - -
Vvi2g0500 744 Gene3D Peptidase S8/S53 domain 139 610 IPR036852 GO:0004252|GO:0006508
Vvi2g0500 744 SUPERFAMILY PA domain 377 456 IPR046450 -
Vvi2g0500 744 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 741 IPR045051 -
Vvi2g0500 744 Pfam Peptidase inhibitor I9 33 114 IPR010259 -
Vvi2g0500 744 Gene3D - 614 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0500 Vvi-Chr2 4341153 4343387 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0500 10 744 Subtilisin-like Serine Gene Family AT1G04110 45.198 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0500 - - vvi:100258212 1484.16