Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0498 ATGGAAGAGAAGGATGGGTTTGTTTCAGCTCGACCGCAAAGAATATTGCCCTTGCATACAACTCATAGCCCTAGTTTCTTGGGGTTGCACCAAGAGTTAGGTTTCTGGAAAGGATCAAACTACGGCAAGGGGGTTATTATTGGAGTTCTGGACACAGGACTATTCCCTGACCATCCTTCATTTAGCGATGAAGGACTACCACCTCCACCAGCTAAATGGAAAGGAAAGTGTGACTTCAATTGGACGTCCTGCAATAACAAAATCATCGGAGCAAGAAATTTTGATAGCGGAGCAGAGGCTGTTCCACCCATTGATGAAGAAGGCCACGGCACCCACACCGCAAGCACAGCTGCAGGGAATTTTGTGCCAAACGCGGATGCGCTCGGGAATGCCAATGGCACGGCTGTTGGCATGGCACCGTTTGCTCACTTGGCAATTTATAAAGTATGTTCCGAATTTGGTTGCGCGGACACTGACATATTAGCAGCACTTGACACTGCCATAGAGGATGGTGTTGATGTACTTTCCCTCTCCCTGGGTGGAGGCTCTGCTCCCTTTTTCGCAGATTCAATTGCACTAGGTGCTTTTTCTGCTATTCAAAAAGGGATATTTGTAAGCTGTTCCGCTGGTAATTCAGGCCCACTCAATGGATCTTTATCAAACGAGGCACCCTGGATACTTACCGTGGGTGCAAGCACCATAGACAGAAAGATAATGGCTACAGCGACGCTTGGAAATGGGGAAGAATTTGATGGCGAATCGCTTTTCCAGCCAAGTGATTTCCCTTCAACATTACTACCTCTCGTGTACGCGGGCGCAAATGGTAATGCCTCGTCCGCCTTATGCGCTCCAGAATCATTGAAAGATGTAGATGTGGCAGGAAAGGTAGTGGTGTGTGATAGAGGTGGGGGCATAGGACGAATTGCCAAAGGGCAAGAAGTGAAGGATGCTGGTGGTGCTGCCATGATTCTTACCAATGACGAACTCAATGGATTCAGCACCTTAGTCGACGCTCATGTTCTTCCTGCAACACATGTGAGTTATGCAGCGGGTTTGAAGATTAAATCTTACATAAAATCAGATTCGGCACCTACCGCTACAATCGTTTTCAAAGGAACCATCATCGGAGTCCCTACGGCTCCCGAAGTTACTTCATTTTCTTCGAGAGGACCAAGCTTGGAAAGCCCTGGTATCTTGAAACCAGACATTATAGGCCCTGGTGTGAGCATTCTAGCAGCATGGCCCTTCCCGCTGGAGAACGATACAACCTCTAAACCGACATTTAACGTGATCTCAGGCACATCAATGTCGTGCCCCCATCTCAGCGGCATTGCGGCTTTGATCAAAAGTGCCCATCCTGACTGGTCTCCTGCTGCCATTAAGTCTGCAATCATCACTACTGCCGATCTTCACAACCTTGAAAATAAGCCCATCATTGACGAAACATTTCAACCCGCTGACTTGTTCGCCACCGGTGCCGGCCATGTGAACCCATCAGCAGCAAATGATCCAGGCCTCATTTACGACCTGGAACCAGATGATTACATACCCTACTTGTGTGGTTTGGGCTACACTGATGAGGAGGTAGGGTTGATTGTGAACCGAACGCTGAAGTGCTCTGAAGAATCATCCATACCTGAGGCACAATTAAATTATCCTTCATTTTCCATTGCATTGGGGCCTAGTTCTGGGACGTACTCAAGGACGGTCACAAACGTGGGTGCGGCCAATTCATCTTACAGTGTTCAGATTTTGGCACCATCTGGAGTTGAAGTGAGTGTGAACCCTGATAAACTCGAGTTCACGGAGGTGAACCAGAAGATAACATATATGGTGAGCTTTAGCAGGACAAGCGCGGGGGGTGAGGGTGGCAAGCCATTTGCGCAAGGATTTCTGAAATGGGTGTCTGATAGTCATTCTGTCCGAAGCCCAATATCTGTTATGTTTGAATGA 1953 0.4803 MEEKDGFVSARPQRILPLHTTHSPSFLGLHQELGFWKGSNYGKGVIIGVLDTGLFPDHPSFSDEGLPPPPAKWKGKCDFNWTSCNNKIIGARNFDSGAEAVPPIDEEGHGTHTASTAAGNFVPNADALGNANGTAVGMAPFAHLAIYKVCSEFGCADTDILAALDTAIEDGVDVLSLSLGGGSAPFFADSIALGAFSAIQKGIFVSCSAGNSGPLNGSLSNEAPWILTVGASTIDRKIMATATLGNGEEFDGESLFQPSDFPSTLLPLVYAGANGNASSALCAPESLKDVDVAGKVVVCDRGGGIGRIAKGQEVKDAGGAAMILTNDELNGFSTLVDAHVLPATHVSYAAGLKIKSYIKSDSAPTATIVFKGTIIGVPTAPEVTSFSSRGPSLESPGILKPDIIGPGVSILAAWPFPLENDTTSKPTFNVISGTSMSCPHLSGIAALIKSAHPDWSPAAIKSAIITTADLHNLENKPIIDETFQPADLFATGAGHVNPSAANDPGLIYDLEPDDYIPYLCGLGYTDEEVGLIVNRTLKCSEESSIPEAQLNYPSFSIALGPSSGTYSRTVTNVGAANSSYSVQILAPSGVEVSVNPDKLEFTEVNQKITYMVSFSRTSAGGEGGKPFAQGFLKWVSDSHSVRSPISVMFE* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0498 650 Gene3D Peptidase S8/S53 domain 44 515 IPR036852 GO:0004252|GO:0006508
Vvi2g0498 650 Pfam PA domain 267 354 IPR003137 -
Vvi2g0498 650 Gene3D - 235 375 - -
Vvi2g0498 650 Pfam Subtilase family 42 475 IPR000209 GO:0006508|GO:0008236
Vvi2g0498 650 SUPERFAMILY PA domain 266 361 IPR046450 -
Vvi2g0498 650 CDD Peptidases_S8_3 18 469 IPR034197 -
Vvi2g0498 650 Gene3D - 519 649 - -
Vvi2g0498 650 SUPERFAMILY Subtilisin-like 18 506 IPR036852 GO:0004252|GO:0006508
Vvi2g0498 650 FunFam subtilisin-like protease SBT1.5 235 375 - -
Vvi2g0498 650 Pfam Fibronectin type-III domain 549 647 IPR041469 -
Vvi2g0498 650 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 647 IPR045051 -
Vvi2g0498 650 FunFam Subtilisin-like protease SBT1.5 44 247 - -
Vvi2g0498 650 PRINTS Subtilisin serine protease family (S8) signature 42 61 IPR015500 -
Vvi2g0498 650 PRINTS Subtilisin serine protease family (S8) signature 105 118 IPR015500 -
Vvi2g0498 650 PRINTS Subtilisin serine protease family (S8) signature 432 448 IPR015500 -
Vvi2g0498 650 CDD PA_subtilisin_like 241 368 - -
Vvi2g0498 650 ProSiteProfiles Serine proteases, subtilase domain profile. 26 502 - -
Vvi2g0498 650 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 47 58 IPR023827 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0498 Vvi-Chr2 4332608 4334560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0498 8 650 Subtilisin-like Serine Gene Family AT1G04110 47.430 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0498 - - vvi:100242816 1289.25