Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0497 ATGGAAAATATGGACGGGTTCATCTCAGCAAGTCCAGAAAAGATGTTGCCTCTACTAACAACGCATTCACCCGATTTCCTAGGGTTGCACCAGGAAATGGGATTCTGGAAAGAATCAAATTTCGGAAAGGGGGTGATCATTGGAGTATTGGACTCTGGAGTGTTGCCTAGCCATCCTTCATTTAGCGGTGAAGGAATTCCACCTCCACCAGCTAAATGGAAAGGAAGCTGTGAGTTCATGGCATCAGAATGTAACAACAAACTAATTGGTGCAAGGTCTTTCAATGTCGGGGCCAAGGCCACAAAGGGAGTGACAGCTGAGCCACCACTTGATGATGATGGGCATGGTACCCATACGGCAAGCACAGCTGCTGGCGCATTTGTGAAGAATGCTGATGTGCTTGGAAATGCCAAGGGCACGGCAGTTGGGATGGCACCTTACGCTCACTTGGCAATATACAAGGTGTGCTTTGGACCAGATTGCCCAGAAAGTGATGTAATAGCTGGACTTGATGCTGCTGTTGAAGATGGTGTTGACGTGATCTCAATCTCTTTAGGTGATCCTGCAGTTCCATTTTTCCAGGACAATATAGCGGTGGGCTCATTTGCAGCAATGCAAAAGGGAATTTTTGTGAGCTGTTCAGCTGGGAATTCTGGCCCTTTCAACACCACTCTATCTAACGAAGCCCCATGGATTCTCACTGTTGGAGCCAGTTCCATTGATAGAACCATCAAAGCTGCTGCAAAACTTGGAAATGGGGAACAATTTGATGGTGAAACCCTTTTCCAGCCCAGTGACTTCCCAGCCACACAATTGCCTCTCGTTTATGCTGGAATGAATGGTAAACCAGAGTCTGCAGTATGTGGAGAGGGATCCTTGAAAAATATTGATGTCAAGGGGAAGGTAGTGTTGTGTGACAGAGGTGGGGGAATAGCCAGAATTGACAAAGGGACGGAAGTGAAAAATGCTGGTGGTGCTGCCATGATTCTCGTGAACCAAGAAAGTGATGGCTTCAGCACCTTAGCTGATGCCCATGTACTTCCTGCAACACATGTGAGCTATGCTGCAGGACTGAAGATTAAAGCCTATATAAACTCAACCGCAACACCAACAGCAGCAATCTTGTTTAAAGGAACCGTAATTGGCAACCCATTGTCTCCCGCTATTACTTCCTTCTCTTCCAGAGGCCCCAGCTTTGCAAGTCCAGGAATTCTGAAACCGGATATTATTGGGCCTGGGGTGAGCATCCTAGCTGCATGGCCCTTCCCTCTTGACAATAACATAAATTCAAAATCCACATTCAACATAATCTCTGGCACATCAATGTCCTGCCCTCATCTTAGTGGCATTGCAGCTTTGCTCAAGAGCTCTCATCCGGATTGGTCACCAGCTGCCATTAAATCTGCCATAATGACTACCGCTGATCTACTAAACGTTGGGGGAAAACCCATTGTCGATGAAAGACTTCTTCCTGCAGACATATTTGCTACTGGCGCAGGTCATGTTAACCCATCAAGAGCCAATGATCCAGGCTTGGTTTATGATATCGAACCTGATGACTATATACCTTATTTATGTGGCCTGGGCTACACAGATACTGAAGTTGGGATCCTTGCACATCGATCCATCAAATGCTCAGAAGAATCCAGCATTCCTGAAGGAGAGCTAAACTACCCTTCATTTTCTGTTGCACTGGGACCACCTCAGACTTTCACGCGGACTGTGACAAATGTTGGTGAGGCCTATTCATCTTACACCGTAACGGCGATTGTACCACAAGGAGTTGATGTGAGTGTCAATCCTGATAAGCTTTACTTCTCAAAGGTGAACCAGAAGCTGACGTATTCAGTGACATTCAGCCACAATAGCTCCAGCGGGAAAAGCAGCAAATTTGCTCAAGGATATCTCAAATGGGTTTCTGGAAAACACTCTGTTGGGAGTCCAATCTCCATTATGTTCAAGTGA 1965 0.4631 MENMDGFISASPEKMLPLLTTHSPDFLGLHQEMGFWKESNFGKGVIIGVLDSGVLPSHPSFSGEGIPPPPAKWKGSCEFMASECNNKLIGARSFNVGAKATKGVTAEPPLDDDGHGTHTASTAAGAFVKNADVLGNAKGTAVGMAPYAHLAIYKVCFGPDCPESDVIAGLDAAVEDGVDVISISLGDPAVPFFQDNIAVGSFAAMQKGIFVSCSAGNSGPFNTTLSNEAPWILTVGASSIDRTIKAAAKLGNGEQFDGETLFQPSDFPATQLPLVYAGMNGKPESAVCGEGSLKNIDVKGKVVLCDRGGGIARIDKGTEVKNAGGAAMILVNQESDGFSTLADAHVLPATHVSYAAGLKIKAYINSTATPTAAILFKGTVIGNPLSPAITSFSSRGPSFASPGILKPDIIGPGVSILAAWPFPLDNNINSKSTFNIISGTSMSCPHLSGIAALLKSSHPDWSPAAIKSAIMTTADLLNVGGKPIVDERLLPADIFATGAGHVNPSRANDPGLVYDIEPDDYIPYLCGLGYTDTEVGILAHRSIKCSEESSIPEGELNYPSFSVALGPPQTFTRTVTNVGEAYSSYTVTAIVPQGVDVSVNPDKLYFSKVNQKLTYSVTFSHNSSSGKSSKFAQGYLKWVSGKHSVGSPISIMFK* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0497 654 PRINTS Subtilisin serine protease family (S8) signature 438 454 IPR015500 -
Vvi2g0497 654 PRINTS Subtilisin serine protease family (S8) signature 42 61 IPR015500 -
Vvi2g0497 654 PRINTS Subtilisin serine protease family (S8) signature 111 124 IPR015500 -
Vvi2g0497 654 FunFam subtilisin-like protease SBT1.5 241 381 - -
Vvi2g0497 654 SUPERFAMILY PA domain 270 392 IPR046450 -
Vvi2g0497 654 Gene3D - 241 382 - -
Vvi2g0497 654 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 650 IPR045051 -
Vvi2g0497 654 SUPERFAMILY Subtilisin-like 18 512 IPR036852 GO:0004252|GO:0006508
Vvi2g0497 654 Pfam Subtilase family 42 482 IPR000209 GO:0006508|GO:0008236
Vvi2g0497 654 Pfam Fibronectin type-III domain 555 651 IPR041469 -
Vvi2g0497 654 FunFam Subtilisin-like protease SBT1.5 44 262 - -
Vvi2g0497 654 ProSiteProfiles Serine proteases, subtilase domain profile. 26 508 - -
Vvi2g0497 654 Gene3D - 525 653 - -
Vvi2g0497 654 Pfam PA domain 272 360 IPR003137 -
Vvi2g0497 654 CDD PA_subtilisin_like 249 374 - -
Vvi2g0497 654 CDD Peptidases_S8_3 18 475 IPR034197 -
Vvi2g0497 654 Gene3D Peptidase S8/S53 domain 44 521 IPR036852 GO:0004252|GO:0006508
Vvi2g0497 654 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 47 58 IPR023827 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0497 Vvi-Chr2 4329210 4331174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0497 8 654 Subtilisin-like Serine Gene Family AT1G04110 45.950 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0497 - - vvi:109121849 1300.03