Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi2g0483 | ATGGCTGAATCAGCATATGTCAATTCAGCGCCTTCTGATGGCTATAGTCAGGGTCAAGAAATTGTGCCATTTCCTACCGCTAAGGGCTCATTGAAATTTTTTCTTCTACATGGGAATCTAGATATTTGGGTCAAGGAGGCCAAAACCCTTCCTAACATGGACATGTTTCATAGATCTCTATCAGACATGTTTGGCAGATTCTCAGTGAAATCTGCCCCAACAATTGAAGGGCACAAGCCTCATAAGATAACCAGTGATCCGTATGTCACAATTTCTGTAAGTGGGGCTGTGATTGGGAGGACTTTTGTGATTAGTAATTCTGAAAACCCTGTTTGGATGCAGCATTTTTATGTTCCTGTTGCACATCATGCTGCAGAAGTGCACTTTGTTGTGAAAGACAGTGATGTTGTGGGCTCTCAGATTATAGGGGCTGTTGGCATCCCGGTGGAGCAGATATACTCGGGTTCAAAAGTTGAAGGAACTTTTCAAATCCTTAATGGGAGTGGGAAGCCCCGTAAGCCTGGAGCTGTCTTGACTCTATCAATCCAGTACACACCAATAGAAAAGGTGACCCTTTACCAATTTGGTGTAGGGTCAGGTCCTGAATACACTGGGGTCCCTGGTACATACTTTCCCCTTAGAACCGGCAGCAAAGTCACACTTTATCAAGATGCCCATGTCCATGATGGCTGCCTTCCAAATTTGAAGCTTGATAATGATGTCCAGTTTGAGCATGGGAAATGTTGGCATGACATCTTTCAAGCAATAAGTCAGGCTCGTCGTCTGATCTACATCACGGGATGGTCTGTGTATCACAGTGTTAGACTGATACGAGATACTGATAATTCAACAGAATTCATGTTGGGGCACCTTCTGAAGACCAAGTCCCAGGAAGGTGTTAGAGTGCTGCTCCTTGTATGGGATGATCCTACTTCTCGAAGCATTCTGGGTTATAAAACAGATGGGATCATGCAAACATATGATGAGGAGACTCGCAGGTTTTTCAAGCACTCTTCTGTGCAGGTGCTACTTTGCCCTCGATCTGCTGGAAAAGGACATAGCTGGATCAAACAACAGGAAGTTGGGACAATCTATACCCATCATCAGAAGACTGTGATTGTGGATGCTGATGCAGGTCATTATAAAAGAAAGATTATTGCTTTCATTGGAGGTCTCGATTTATGTGCAGGGCGATATGATACTCCGCAGCATCATATTTTTAAAACATTACAAACAGTTCATCAAGATGACTACCATAATCCTAATTTCACGGGGCCTACTACTGGATGTCCACGAGAACCCTGGCATGATATGCACTGTAGAATTGATGGTCCTGCAGCATATGATATCCTCACCAATTTTGAGGAGCGCTGGTTAAAGGCTTCTAAACCCCGTGGACTTCAAAAGCTGAAAGCATCATCATATGATGATGCTTTACTCAAGCTTGAGAGAATTTCCGACATCATTGGGATGGCAGATGCCTCCTGCCCAAATGAAAACGATCCAGAAGCTTGGCATGTCCAGGTCTTCCGTTCGATTGACTCCACTTCTGTGGAAGGCTTTCCTAAGGAACCAAAGGAAGCTACAAGCAAGAACCTGGTTTGTGGGAAAAATATACTGATAGACATGAGTATACATACAGCATATGTCAAGGCTATTCGTGCTGCTCAGCATTTCATTTATATTGAGAACCAGTACTTCCTCGGGTCATCTTATAATTGGGCTTCTTACAAAGACTTAGGTGCAAACAATTTAATACCTATGGAAATTGCTCTCAAAATCGCTAACAAAATCAGAGCAAAAGAGAGGTTTTCTGCATATATTGTTATCCCAATGTGGCCAGAGGGCGTTCCTACAAGTACTCCTACACAGAGGATTCTTTTTTGGCAGCACAAAACAATGCAAATGATGTATGAAATGGTTTACAAGGCACTGCAAGAGGTTGGGCTTGAGAACCAATATCATCCACAAGACTATTTAAATTTCTTCTGCCTGGGGAATCGCGAGGAAGGAGTTGACACCTCAAATGCAGGAAATCAATCCGCAGCAAACACCCCTCAAGCACTTGCTCGTAAAAGCAGACGCTTCATGATTTATGTCCATTCAAAAGGAATGATAGTGGATGATGAATACTTGATAATAGGGTCTGCAAACATCAATCAACGTTCCATGGAAGGAACCAGAGACACCGAAATTGCAATGGGTGCCTATCAGCCTCATCATACATGGGCAAGAAAACAGTCTAGCCCACATGGTCAAATATATGGATATAGGATGTCACTATGGGCAGAGCACACTGGAGTACTGGAGGAATGTTTCAAGCAACCAGAAAGTGTTGAGTGTGTTAGACGGCTGAGGTCCTTGGGTGAGCTCAACTGGAGGCAGTTTGCAGCAGATCAAATAACAGAAATGAAGGGACACCTTCTGAAGTACCCTGTGGAAGTGGAGAGAACAGGGAAGGTGAGGCCTCTTCCTGGGTCTGAAACATTTCCAGATGTCGGTGGGAACATAGTGGGGACTTTTACAGCCATTCAAGAAAATCTCACCATATAA | 2553 | 0.4367 | MAESAYVNSAPSDGYSQGQEIVPFPTAKGSLKFFLLHGNLDIWVKEAKTLPNMDMFHRSLSDMFGRFSVKSAPTIEGHKPHKITSDPYVTISVSGAVIGRTFVISNSENPVWMQHFYVPVAHHAAEVHFVVKDSDVVGSQIIGAVGIPVEQIYSGSKVEGTFQILNGSGKPRKPGAVLTLSIQYTPIEKVTLYQFGVGSGPEYTGVPGTYFPLRTGSKVTLYQDAHVHDGCLPNLKLDNDVQFEHGKCWHDIFQAISQARRLIYITGWSVYHSVRLIRDTDNSTEFMLGHLLKTKSQEGVRVLLLVWDDPTSRSILGYKTDGIMQTYDEETRRFFKHSSVQVLLCPRSAGKGHSWIKQQEVGTIYTHHQKTVIVDADAGHYKRKIIAFIGGLDLCAGRYDTPQHHIFKTLQTVHQDDYHNPNFTGPTTGCPREPWHDMHCRIDGPAAYDILTNFEERWLKASKPRGLQKLKASSYDDALLKLERISDIIGMADASCPNENDPEAWHVQVFRSIDSTSVEGFPKEPKEATSKNLVCGKNILIDMSIHTAYVKAIRAAQHFIYIENQYFLGSSYNWASYKDLGANNLIPMEIALKIANKIRAKERFSAYIVIPMWPEGVPTSTPTQRILFWQHKTMQMMYEMVYKALQEVGLENQYHPQDYLNFFCLGNREEGVDTSNAGNQSAANTPQALARKSRRFMIYVHSKGMIVDDEYLIIGSANINQRSMEGTRDTEIAMGAYQPHHTWARKQSSPHGQIYGYRMSLWAEHTGVLEECFKQPESVECVRRLRSLGELNWRQFAADQITEMKGHLLKYPVEVERTGKVRPLPGSETFPDVGGNIVGTFTAIQENLTI* | 851 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi2g0483 | 850 | SUPERFAMILY | Phospholipase D/nuclease | 206 | 464 | - | - | |
| Vvi2g0483 | 850 | Gene3D | Endonuclease Chain A | 236 | 485 | - | - | |
| Vvi2g0483 | 850 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 696 | 723 | IPR001736 | GO:0003824 | |
| Vvi2g0483 | 850 | FunFam | Phospholipase D delta | 33 | 180 | - | - | |
| Vvi2g0483 | 850 | SMART | pld_4 | 696 | 723 | IPR001736 | GO:0003824 | |
| Vvi2g0483 | 850 | SMART | pld_4 | 363 | 398 | IPR001736 | GO:0003824 | |
| Vvi2g0483 | 850 | Pfam | Phospholipase D C terminal | 770 | 840 | IPR024632 | - | |
| Vvi2g0483 | 850 | Pfam | Phospholipase D Active site motif | 364 | 398 | IPR001736 | GO:0003824 | |
| Vvi2g0483 | 850 | Pfam | Phospholipase D Active site motif | 697 | 723 | IPR001736 | GO:0003824 | |
| Vvi2g0483 | 850 | FunFam | Phospholipase D delta | 239 | 478 | - | - |
Showing 1 to 10 of 22 entries
Duplication type information
Functional genes information
Pathway information