Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0468 ATGGCTTCCGTCGCTCGCTCCGATCCCAAACTCCGAAAACCTTTCCCAAAACCGCTGATGTTGAAAGATTTTCTGTTGGATGACATGAGTTCCTGCTCGTCCAACGGTTTCAAATCGTTTCCACGGAGGCATTGCTGCACAACCGTCCGATATCTTGTCGAGAAGGATTTCAAGGCTAAAGACTCAACCAAGGCCAAGCGACTTTTAAGGAAAAGTCGATCAAAAGCTGCGGCATCGACCACGATCTCCGCTTTGCAGAGAGCGTCCGAGGCCGTAATTAACGCCGTTAAGCTCCTACCGTTCTCTTCCGTTAAGGCTCCGTCCTTTTCCGTAAAAAACCGTTCCAGAAAAGGCATTTTGCCGAGAAGTTTATCGCGGAAGCTGCTAAAACGGAAGTTCTGGAAGAGAACCGCAGTCGAGGAGGAAATCGAGATCGAAAGGTGGAAATCGTTCCATGACTTTCTAGAGGAAAAACAGAAATCGTCCTCTCACATTCGTCATCATTCCACCACCACCACCACCATAGACTCAACCAGTGCAACCAGTAACAGTAACAGTTGGTCTGACGGGGAATTTACTTTGGATTATTTACAATTTTCCAGCTGTAACTCGGTGAGTTCAGGCGAAAATGATGCCGTTTCAAGAAAAAAATATTTACCGGAGAAGATGGTCAGCAAGAGAGTAGGCGTAGCAATCGGTGGGGATTCCATGGAAGCAACCTCTACCACCTGCTCAGAAAAAAAGGAGAAGGAGTGGCCAAACGAGGAGGAGAAGGAACAATTCAGTCCGGTTTCTGTGTTGGACTGTCCATTCGAGGATGAAGACGAAGATGAAGATGAAGAGATGTGCTCCCCTTTCCAACATAGAGTCACTCACATGGAAGGTACGTCTAACTCTCTTCTGCAAAAACTCTTTTGA 918 0.4695 MASVARSDPKLRKPFPKPLMLKDFLLDDMSSCSSNGFKSFPRRHCCTTVRYLVEKDFKAKDSTKAKRLLRKSRSKAAASTTISALQRASEAVINAVKLLPFSSVKAPSFSVKNRSRKGILPRSLSRKLLKRKFWKRTAVEEEIEIERWKSFHDFLEEKQKSSSHIRHHSTTTTTIDSTSATSNSNSWSDGEFTLDYLQFSSCNSVSSGENDAVSRKKYLPEKMVSKRVGVAIGGDSMEATSTTCSEKKEKEWPNEEEKEQFSPVSVLDCPFEDEDEDEDEEMCSPFQHRVTHMEGTSNSLLQKLF* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0468 305 MobiDBLite consensus disorder prediction 234 280 - -
Vvi2g0468 305 PANTHER OS04G0572500 PROTEIN 10 304 - -
Vvi2g0468 305 MobiDBLite consensus disorder prediction 242 262 - -
Vvi2g0468 305 MobiDBLite consensus disorder prediction 161 184 - -
Vvi2g0468 305 MobiDBLite consensus disorder prediction 166 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0468 Vvi-Chr2 3946577 3948737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0468 1 274 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 32.573 1.17e-23 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0468 - - vvi:104881794 506.523