Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0456 ATGGCTCAAACCGCTTTAACCGAAGGAGTCAGTGTCCTTCCTTCGATCCTTCCTCTCCCGCCTCTCATCTTTCTCATCCTCAAGCATCTCAAAGCAAAGTCTCCATCACTTCCACCGGGTCCATATCCATGGCCACTCATAGGCAACGTTCACCAGATAGGGAAACAACGCCATATTGCTATGATCGACTTTGCACGATCGTATGTTCCACTCTTCTCGCTAAGACTAGGAACTCAAACTTTGGTCGTGGGATCATCAGCTGCCGCTGCCAGAGAAATTCTCAACTCCTATGACCACATTTTATGTGCCCGATGTGTTCCTCGAGTGATACCATGCAGAATAACTGGTTTGAACGGGTTCGCAGTAGGGTGGTCTCCCGAGTGTGATGACAGGTGGAAGTATTTGCGCACAATGTGTCGAACTCAACTTTTCTCAGGCAAAGCAATAGAGTCACAAGCATGCTTGCGAGAGAAAAAGCTGATGGAGGTGGTTATGTTTTTGAGTTCAATGGAGGGTAAGGAGCTACTCGTTGCTGGTACAGACTCTAGTAGTGTAACCGTTGAGTGGGCAATGGCAGAGTTGATAAGAAGTCCAGAATCCTTGAAGAAAATCCGTGAAGAACTCACCACAGAGATCAACCAAAACATGCTGAAAGATTCCGATCTACGGAAGCTACCATACCTTCAAGCTTGCCTCAAGGAAACCCTGAGGCTGCACCCGCCTGGACCTTTTCTCCTTCCTCACCGCGCTGTCGAATCATGCAAAGTAATGAACTATACCATTCCAAAAGATGCTCAAGTACTAGTAAACGCCTGGGCCATTGGAAGAGACCCCATGAGTTGGGAAGACCCTTTAGTATTCAAACCAGAGCGTTTCTTGAACTCAACTGTGGATTTTCAAGGGAATAATTTTGAATTTATACCCTTTAGTTCACGAAGGAGAATCTGCCCTGGACTTCCCATGGCGGTAAAACTGATTCCCTTGGTTCTGGCTTCCTGGATTCATTTCTTCGATTGGTCTCTTCCGAATGGGGGTGATCCTAAAGATATAGACATGAGTGAAAAGTATAGTGCCAATATACGGAAGGAACAGCCTCTACTTCTCATTCCTAAAGGCAGAAAATGA 1125 0.4622 MAQTALTEGVSVLPSILPLPPLIFLILKHLKAKSPSLPPGPYPWPLIGNVHQIGKQRHIAMIDFARSYVPLFSLRLGTQTLVVGSSAAAAREILNSYDHILCARCVPRVIPCRITGLNGFAVGWSPECDDRWKYLRTMCRTQLFSGKAIESQACLREKKLMEVVMFLSSMEGKELLVAGTDSSSVTVEWAMAELIRSPESLKKIREELTTEINQNMLKDSDLRKLPYLQACLKETLRLHPPGPFLLPHRAVESCKVMNYTIPKDAQVLVNAWAIGRDPMSWEDPLVFKPERFLNSTVDFQGNNFEFIPFSSRRRICPGLPMAVKLIPLVLASWIHFFDWSLPNGGDPKDIDMSEKYSANIRKEQPLLLIPKGRK* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0456 374 Gene3D Cytochrome P450 171 374 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0456 374 Gene3D Cytochrome P450 27 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0456 374 SUPERFAMILY Cytochrome P450 36 373 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0456 374 Pfam Cytochrome P450 38 150 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0456 374 Pfam Cytochrome P450 173 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0456 374 PRINTS E-class P450 group I signature 306 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0456 374 PRINTS E-class P450 group I signature 316 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0456 374 PRINTS E-class P450 group I signature 229 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0456 374 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0456 374 PRINTS E-class P450 group I signature 270 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0456 374 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 174 371 - -
Vvi2g0456 374 FunFam Putative cytochrome P450 superfamily protein 167 371 - -
Vvi2g0456 374 PRINTS P450 superfamily signature 230 241 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0456 374 PRINTS P450 superfamily signature 307 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0456 374 PRINTS P450 superfamily signature 178 195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0456 Vvi-Chr2 3838090 3839902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0456 16 370 Cytochrome P450 AT3G26180 36.043 1.42e-76 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0456 - - vvi:100249676 413.305