Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0455 ATGGATGAAGCAGCTTTAACTGAAGGAACCAATCTCTTTCCTTTGATCCTTCTTCTCCTGCCTCTCATCTTTCTCATCCTCAAGCATCTCAAATCAAAGTCTCCAATATCACTTCCACCGGGTCCATATCCATGGCCAATCATAGGCAACGTTCACCAGATAGGGAAACAGCGTCATATAGCTATGGCCGACTTTGCACGATCCTATGGTCCGCTCTTCTCACTACGACTCGGAACTCAAACTCTGATCGTGGGATCATCGGCGGCCGCCGCCAAAGAAATTCTCAGCTCTTATGACCGTATTTTCTGTGCCCGATATGTTCCGGGAGTGATGCCAGAAAAGAGCTCAGAATTCTATAATAACTCAATAGTATGGTCGCTTGAGTGTGATGACAGATGGAAGTACTTGCGTACAATGTGCCGAACTCAACTTTTCTCGGGCAAAGCCATCGAGTCACAAGCATGTTTACGAGAGAAAAAACTGATGGAGGTGGTTGGATTCTTGAGCTCAATGGAGGGTAGGGTGGTGAAACTTAAAGAACTAGCCTTTGTTACTGCACTGAATATGATAAGTAATGCTCTATTATCAAAAGATCTAGTCAGTTTGGAGGATGAGACTGCAGTTGCGAGGATGCTAGGATGTGTCAAGAAAACCGTGGACGTGATGTCTACTCCAAATTTAGCTGATTATTATCCAATTCTACGTGGGTTGGATCTTCAGAGGTTACAGAAGAAATCCAGGGATTCCTTTGTGGAGTTGTTTAGTCTGTGGCAGCCTATCGTTAAAGAAAGAAGAGAAAGAAAAGGGAGCCATGCTACTAGGCAACATGATTTTCTCGATGCTCTAATCAACGATGGTTTTACAGATGATCGGATTAACTTTTTACTTGGGGAGCTACTTATTGCTGGTACAGAATCTACTAGTGTAACCACTGAGTGGGCAATGGCAGAGTTGATAAGAAGTCCAGACTCCATGAAGAAAATCCGTGAAGAACTCACCACAGAGATCAACAAAAGCACACTGAAAGATTCCGATCTACGGAAGCTACCGTACCTTCAAGCTTGCCTCAAGGAAACCCTGAGGCTGCATCCACCTGGACCATTTCTCCTTCCTCACCGTGCACTTGAATCATGCAAAGTGATGAACTATACGATTCCAAAAGATGCTCAAGTACTGGTAAACGCCTGGGCCATTGGAAGAGACCCCATGAGTTGGGAAGACCCTTTAGTATTCAAACCAGAGCGCTTCCTGAACTCAATTGTGGATTTTCAAGGGACTAATTTTGAATTCATACCCTTCGGCGCAGGAAGGAGAATCTGCCCTGGACTTCCCATGGCTGTAAAGCTGATTCCCCCGGTTCTGGTTTCCTGGATTCATTTCTTTGATTGGTCTCTTCCGAATTGGGGTGATCCTAAAGAGATAGACATGAGGGAAAAGTTTGGTGCCAATATACAGAAGGAACATCCTCTACTTCTCATTCCTAAAGTTAGAAAATGGCCACAAGTTTGTGCCTAA 1515 0.4449 MDEAALTEGTNLFPLILLLLPLIFLILKHLKSKSPISLPPGPYPWPIIGNVHQIGKQRHIAMADFARSYGPLFSLRLGTQTLIVGSSAAAAKEILSSYDRIFCARYVPGVMPEKSSEFYNNSIVWSLECDDRWKYLRTMCRTQLFSGKAIESQACLREKKLMEVVGFLSSMEGRVVKLKELAFVTALNMISNALLSKDLVSLEDETAVARMLGCVKKTVDVMSTPNLADYYPILRGLDLQRLQKKSRDSFVELFSLWQPIVKERRERKGSHATRQHDFLDALINDGFTDDRINFLLGELLIAGTESTSVTTEWAMAELIRSPDSMKKIREELTTEINKSTLKDSDLRKLPYLQACLKETLRLHPPGPFLLPHRALESCKVMNYTIPKDAQVLVNAWAIGRDPMSWEDPLVFKPERFLNSIVDFQGTNFEFIPFGAGRRICPGLPMAVKLIPPVLVSWIHFFDWSLPNWGDPKEIDMREKFGANIQKEHPLLLIPKVRKWPQVCA* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0455 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Vvi2g0455 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 16 495 - -
Vvi2g0455 504 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0455 504 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0455 504 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0455 504 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0455 504 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0455 504 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0455 504 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0455 504 Gene3D Cytochrome P450 25 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0455 504 SUPERFAMILY Cytochrome P450 39 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0455 504 Pfam Cytochrome P450 39 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0455 504 CDD CYP76-like 66 494 - -
Vvi2g0455 504 FunFam Putative cytochrome P450 superfamily protein 292 495 - -
Vvi2g0455 504 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0455 504 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0455 504 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0455 Vvi-Chr2 3833681 3835488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0455 12 494 Cytochrome P450 AT2G45570 39.683 5.06e-117 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0455 - - vvi:100244525 999.579