Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0427 ATGTACAAGTACCTTAAGAACATGGTGTTGAACCTCTTTGGTCCTGAAAGCCTGAAAAAGATGCTCCCTGAGGTTGAACACGCCACATGTAGAAATTTAGACAGGTGGTCATGTCAAGACACTGTTGAATTGAAGGAAGCAACTGCAAGAATGATATTTGATCTGACTGCAAAGAAACTCATCAGTTATGAACAAGACAAGTCCTCAGAAAATCTAAGGGAGAACTTTGTTGCTTTCATACAGGGATTAATCTCCTTCCCTTTGGATATTCCTGGAACAGCTTACCACAAATGTTTGCAGGGAAGGAAGAAGGCAATGAGCATGCTGAAGAACATGCTAAAGGAGAGACGAGCAATGCCTAGGAAGAAGCAGAGTGATTTCTTTGATTATGTAATTGAAGAACTTAAGAAAGAAGGAACAATCCTCACAGAAGCAATTGCATTAGATTTAATGTTTGTACTCCTCTTTGCCAGCTTCGAGACAACTTCATTGGCTATAACTTTAGCTACGAAGTTTCTTTCTGACCATCCTTTGGTGCTGAAGAAATTAACGGAAGAGCATGAGGCAATTCTAGAAAAACGGGAAATTGTGGATTCTGAACTTACATGGAAAGAATACAAATCAATGACATTCACATTTCAGGTGGAAAAGAACAGTTCTATTTCTCTGATAAAGCTTGATCCATTTATCCCATTATGTTGTCCTTTTCTACAAACTAACCACTTCAACTTGCAGTTCATCAATGAAACAGTTAGGCTGGCAAATATAGTTCCAGGAATCTTCAGGAAGGCGCTGAGAGAAATCCAGTTTAAGGGATATACCATTCCAGCAGGTTGGGCGATTATGGTCTGTCCGCCAGCTGTGCATCTGAACCCAGCAAAATATGAAGATCCCCTTGCCTTCAATCCATGGAGATGGGAGGGAGTAGAATCCAGTGGTGCATCTAAGCATTTCATGGCCTTTGGTGGTGGCATGAGGTTTTGTGTCGGAACAGACTTTACCAAAATGCAGATGGCTGTGTTCCTCCATTGCTTGGTTACAAAGTACAGGTGGCAAACAGTCAGAGGAGGAGACATTGTCCGGACTCCTGGTTTACAATTTCCAAATGGTTTCCATGTTCAGATATTGGGGAAAAATTAA 1140 0.4114 MYKYLKNMVLNLFGPESLKKMLPEVEHATCRNLDRWSCQDTVELKEATARMIFDLTAKKLISYEQDKSSENLRENFVAFIQGLISFPLDIPGTAYHKCLQGRKKAMSMLKNMLKERRAMPRKKQSDFFDYVIEELKKEGTILTEAIALDLMFVLLFASFETTSLAITLATKFLSDHPLVLKKLTEEHEAILEKREIVDSELTWKEYKSMTFTFQVEKNSSISLIKLDPFIPLCCPFLQTNHFNLQFINETVRLANIVPGIFRKALREIQFKGYTIPAGWAIMVCPPAVHLNPAKYEDPLAFNPWRWEGVESSGASKHFMAFGGGMRFCVGTDFTKMQMAVFLHCLVTKYRWQTVRGGDIVRTPGLQFPNGFHVQILGKN* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0427 379 CDD CYP90-like 1 375 - -
Vvi2g0427 379 PANTHER CYTOCHROME P450 26 3 355 - -
Vvi2g0427 379 Pfam Cytochrome P450 245 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0427 379 Pfam Cytochrome P450 21 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0427 379 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 321 330 IPR017972 GO:0005506|GO:0016705
Vvi2g0427 379 Gene3D Cytochrome P450 1 376 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0427 379 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0427 379 PRINTS P450 superfamily signature 245 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0427 379 PRINTS P450 superfamily signature 319 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0427 379 PRINTS P450 superfamily signature 157 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0427 379 Coils Coil 180 200 - -
Vvi2g0427 379 PRINTS E-class P450 group I signature 284 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0427 379 PRINTS E-class P450 group I signature 318 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0427 379 PRINTS E-class P450 group I signature 146 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0427 379 PRINTS E-class P450 group I signature 166 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0427 379 PRINTS E-class P450 group I signature 244 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0427 379 PRINTS E-class P450 group I signature 328 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0427 379 SUPERFAMILY Cytochrome P450 3 362 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0427 Vvi-Chr2 3591529 3593551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0427 1 378 Cytochrome P450 AT1G12740 70.573 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0427 - - vvi:100258216 691.419