Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0421 ATGGTAGCCATGTTAGCAGAAGGAACCAGCTTCTTCGATGTCTTCTTGCCTTTCCTCCTCCTCCTCCCACTTCTGGTCTTTCTCATCCTAAAGCTTTTAAAAGATTCATCTTCGCTCAAATCTCCACCACTCCCACCAGGACCTTCTCCATGGCCAATCTTAGGCAATCTTTTGCATCTGGGAAACATGCCTCACATCAGTTTAGCTCGCTTTAGCCAGTCCTATGGTCCTCTCATCTCGCTAAGACTCGGATCCCAAATCTTGGTGGTGGCATCAACATCCTCCGCCGCCATGGAAATTCTCAAGACACATGATCGTGTTCTATCTGGTAGATATGTTCCTCACGCAGTACCAGCCAAGAATTCTGAAATCAACCCCATGTCTCTTGGATGGGCAGTTGAGTGCAATGGTGCATGGAAGAATCTAAGGACAGTTTGTAGGGCTGAACTTTTCTCAACCAAAGTAATGGAGTCTCAAGCATGGGTGGGAGAGAAGAAGGTGATGGAGATGGTGAGATTTGTGAGCACAAAGGAGGGGGAGGTGATGAAAGTTGGAGAAGTGGTGTTTGCTACTGTACTTAATACCCTGACTACTGTTCTTATGTCCAGAGATTTTATCAGCTTTGAGGATGATAATAAGGATGGAGGCATGAAAGGACTTGTAAGGAAAATGGTGATGGCCATGGCTGCTCCGAATTTGGATGATTTTTATTTAATTTTCAGTGGATTGGATCTTCAAGGTCTGAACAAGAAGACCAAGGAGCTGATTGCAAGGATTTGTTCTATGTGGGAGTCTGTCATCAGAGAGAGAAGAGAAGGTGCAAGCGATGACCCAAGCAAGCAGGACTTCTTGAATATTCTGATCCGCAGCGGCTACTCGGATGATCAAATCAATCAATTGTTCATGGAGTTGCTTACTGCAGGGGCAGACACCAGTAGTTCAACATTGGAGTGGGCAATGGCAGAACTGATAAAAAGTCCAGAATCCATGAAGAAAGTCCATGAAGAACTTGCAAGAGAAATCAGTGATAATCTGCCAAAAGCATCTGATCTACCTCACCTACCATACCTCCAAGCCTGTGTCAAAGAAACCCTGAGGCTGCACCCCTCGGCACCATTGCTCCTTCCTCGCCGTGCATCAGTCTCATGTGAAGTTATGAATTATACCATTCCAAAGGACTCTCAAATATGGGTAAATGCCTGGGCAATTGGGAGAGACCCCATGAATTGGGAAGACCCTCTAGTGTTTAAACCAGAGCGCTTCCTCAACTCAGCTGTAGACTTCAAAGGGAATAATCTAGAATTCATACCCTTTGGTGCTGGAAGGAGAATATGCCCTGGTCTGCCCATGGCTGCAAGGCTTCTTCCTTTGATTCTTGCCTCCTTGACCCATTTCTTTGATTGGTCTCTTCCAAATGGAACCACTCCAGATGAGCTAGACATGAACGATAAGTTCGGTGTAACATTGCAGAAGGAACAACCTCTACTCATCATTCCTAAAGTTCGAAAATGA 1512 0.4544 MVAMLAEGTSFFDVFLPFLLLLPLLVFLILKLLKDSSSLKSPPLPPGPSPWPILGNLLHLGNMPHISLARFSQSYGPLISLRLGSQILVVASTSSAAMEILKTHDRVLSGRYVPHAVPAKNSEINPMSLGWAVECNGAWKNLRTVCRAELFSTKVMESQAWVGEKKVMEMVRFVSTKEGEVMKVGEVVFATVLNTLTTVLMSRDFISFEDDNKDGGMKGLVRKMVMAMAAPNLDDFYLIFSGLDLQGLNKKTKELIARICSMWESVIRERREGASDDPSKQDFLNILIRSGYSDDQINQLFMELLTAGADTSSSTLEWAMAELIKSPESMKKVHEELAREISDNLPKASDLPHLPYLQACVKETLRLHPSAPLLLPRRASVSCEVMNYTIPKDSQIWVNAWAIGRDPMNWEDPLVFKPERFLNSAVDFKGNNLEFIPFGAGRRICPGLPMAARLLPLILASLTHFFDWSLPNGTTPDELDMNDKFGVTLQKEQPLLIIPKVRK* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0421 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Vvi2g0421 503 Pfam Cytochrome P450 45 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0421 503 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 20 500 - -
Vvi2g0421 503 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0421 503 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0421 503 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0421 503 FunFam Cytochrome P450 76C4 36 498 - -
Vvi2g0421 503 SUPERFAMILY Cytochrome P450 45 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0421 503 CDD CYP76-like 72 499 - -
Vvi2g0421 503 Gene3D Cytochrome P450 31 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0421 503 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0421 503 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0421 503 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0421 503 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0421 503 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0421 503 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0421 503 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0421 Vvi-Chr2 3524010 3526293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0421 37 499 Cytochrome P450 AT2G45550 40.461 9.60e-121 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0421 - - vvi:100253084 933.324