Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0420 ATGAGCAACTTATCCTTGCCAGAAAATCAGGGCTCAAGGCAAACCAAGCAGCTATTTTCTAAACCTAAGTTTGCTTTGGAGCCCTCAACTGAAACTCTCCAAGAGAAGCTTCTGGTGGAGAATGAAAAATATGCTGAATCTAAGAAAAGCTCTGGTAGGAGGAATTCAGATCTGCAAAAGGACAAAGGTTCCAAGAGAAAATCAAAAAACAAAGACTGTAACTTGCCTTGCCGTTCATCAAAACGGCTTGCTGGGCTCAAACCCGACCTGGTAGGCAACTCAGGATCCAGCGAACAGGCTCTTGCAGTTGCAGATAAGATCTCTGGTAAAAGTGAAGTAATTCCAGCTCTAGGTGTGATAATGGGCAGTTTGGACAATACGGCATGTTGTCAACTTGAGGTTGTCCTAGAAGCAGAGCCTGGACATCATGCTTCCAGAGCCATAGAAGCTCCATCAGATGTAGAGCAATCAAAGAAAGACAATAGGCATCTTGAAGATGAAGCTGTTCAAGAAGAGGAAGCTGGGAAACTGGAGACAGGGAAAAAGACTGGTGATGAGCCGGAGCTGCCACCAATGGACTTCCCTTTTATGGATGTCTGGTCAGATCCATGCCTAGAAGTTGCGTTCAAAACTCTTACGGGTGCTATACCCATAGAAGATAATCTGGAAATTGAGGGTTACTTTCAGCAACAAATTGACTCTTCTCACACCCAGAACAGTAGCCTGACACTGCCAGATTTTGGTTTACCAAGTTCCCAGTTTGATGCACAAGAAAAATCTGTACCCAGACAGCACTTTGCTTCAAAACCATCAGTTTTGCCCAAGGAAATCATGACCCCAAGCAATATCCTGGTCAACTTATGTCAGTTTTCATCACTGGAGAGGAGATTCAGAGAATTAGGGATAACTTTGTTACTTTCCTTCCTCATCCCAATCGAATTCATGGTAGCCATGTTAGCAGAAGGAACCAGCTTCTTCGATGTCTTCTTGCCTTTCCTCCTCCTCCTCCCACTTCTGGTCTTTCTCATCCTAAAGCTTTTAAAAGATTCATCTTCGCTCAAATCTCCACCACTCCCACCAGGACCTTCTCCATGGCCAATCTTAGGCAATCTTTTGCATCTGGGAAACATGCCTCACATCAGTTTAGCTCGCTTTAGCCAGTCCTATGGTCCTCTCATCTCGCTAAGACTCGGATCCCAAATCTTGGTGGTGGCATCAACATCCTCCGCCGCCATGGAAATTCTCAAGACGCATGATCGTGTTCTATCTGGTAGATATGTTCCTCACGCAGTACCAGCCAAGAATTCTGAAATCAACCGCATGTCTCTTGGATGGGCAGTTGAGTGCAATGATGCATGGAAGAATCTAAGGACAGTTTGTAGGGCTGAACTTTTCTCAACCAAAGTAATGGAGTCTCAAGCATGGGTGGGAGAGAAGAAGGTGATGGAGATGGTGAGATTTGTGAGCACAAAGGAGGGGGAGGTGATGAAAGTTGGAGAAGTGGTGTTTGCTACTGTACTTAATACCCTGACTACTGTTCTTATGTCCAGAGATTTTATCAGCTTTGAGGATGATTATAAGGATGGAGGCATGAAAGGACTTGTAAGGAAAATGATGATGGCCATGGCTGCTCCGAATTTGGATGATTTTTATTTAATTTTCAGTGGATTGGATCTTCAAGGTCTGAACAAGAAGACCAAGGAGCTGATTGCAAGGATTTGTTCCATGTGGGAGTCTGTCATCAGAGAGAGAAGAGAAGGTGCAAGCGATGACCCAAGCAAGCAGGACTTCTTGAATATTCTGATCCGCAGCGGCTACTCGGATGATCAAATCAATCAATTGTTCATGGAGTTGCTTACTGCAGGGGCAGACACCAGTAGTTCAACATTGGAGTGGGCAATGGCAGAACTGATAAAAAGTCCAGAATCCATGAAGAAAGTCCATGAAGAACTTGCAAGAGAAATCAGTGATAATCTGCCAAAAGCATCTGATCTACCTCACCTACCATACCTCCAAGCCTGTGTCAAAGAAACCCTGAGGCTGCACCCCTCGGCACCATTGCTCCTTCCTCGCCGTGCATCAGTCTCATGTGAAGTTATGAATTATACCATTCCAAAAGACTCTCAAATATGGGTAAATGCCTGGGCAATTGGGAGAGACCCCATGAATTGGGAAGACCCTCTAGTGTTTAAACCAGAGCGCTTCCTCAACTCAGCTGTAGACTTCAAAGGGAATAATCTAGAATTCATTCCCTTTGGTGCTGGAAGGAGAATATGCCCTGGTCTGCCCATGGCTGCAAGGCTTCTTCCTTTGATTCTTGCCTCCTTGACCCATTTCTTTGATTGGTCTCTTCCAAATGGAACCACTCCAGATGAGCTAGACATGAATGATAAGTTCGGTATAGCATTGCAGAAGGAACAACCTCTACTCATCATTCCTAAAGTTCGAAAATGA 2454 0.4478 MSNLSLPENQGSRQTKQLFSKPKFALEPSTETLQEKLLVENEKYAESKKSSGRRNSDLQKDKGSKRKSKNKDCNLPCRSSKRLAGLKPDLVGNSGSSEQALAVADKISGKSEVIPALGVIMGSLDNTACCQLEVVLEAEPGHHASRAIEAPSDVEQSKKDNRHLEDEAVQEEEAGKLETGKKTGDEPELPPMDFPFMDVWSDPCLEVAFKTLTGAIPIEDNLEIEGYFQQQIDSSHTQNSSLTLPDFGLPSSQFDAQEKSVPRQHFASKPSVLPKEIMTPSNILVNLCQFSSLERRFRELGITLLLSFLIPIEFMVAMLAEGTSFFDVFLPFLLLLPLLVFLILKLLKDSSSLKSPPLPPGPSPWPILGNLLHLGNMPHISLARFSQSYGPLISLRLGSQILVVASTSSAAMEILKTHDRVLSGRYVPHAVPAKNSEINRMSLGWAVECNDAWKNLRTVCRAELFSTKVMESQAWVGEKKVMEMVRFVSTKEGEVMKVGEVVFATVLNTLTTVLMSRDFISFEDDYKDGGMKGLVRKMMMAMAAPNLDDFYLIFSGLDLQGLNKKTKELIARICSMWESVIRERREGASDDPSKQDFLNILIRSGYSDDQINQLFMELLTAGADTSSSTLEWAMAELIKSPESMKKVHEELAREISDNLPKASDLPHLPYLQACVKETLRLHPSAPLLLPRRASVSCEVMNYTIPKDSQIWVNAWAIGRDPMNWEDPLVFKPERFLNSAVDFKGNNLEFIPFGAGRRICPGLPMAARLLPLILASLTHFFDWSLPNGTTPDELDMNDKFGIALQKEQPLLIIPKVRK* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0420 817 MobiDBLite consensus disorder prediction 43 80 - -
Vvi2g0420 817 FunFam Cytochrome P450 76C4 350 812 - -
Vvi2g0420 817 MobiDBLite consensus disorder prediction 1 27 - -
Vvi2g0420 817 SUPERFAMILY Cytochrome P450 359 816 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0420 817 CDD CYP76-like 386 813 - -
Vvi2g0420 817 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 334 814 - -
Vvi2g0420 817 MobiDBLite consensus disorder prediction 1 19 - -
Vvi2g0420 817 MobiDBLite consensus disorder prediction 144 190 - -
Vvi2g0420 817 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 752 761 IPR017972 GO:0005506|GO:0016705
Vvi2g0420 817 PRINTS P450 superfamily signature 750 759 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0420 817 PRINTS P450 superfamily signature 673 684 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0420 817 PRINTS P450 superfamily signature 621 638 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0420 817 Gene3D Cytochrome P450 349 815 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0420 817 MobiDBLite consensus disorder prediction 144 188 - -
Vvi2g0420 817 Coils Coil 154 174 - -
Vvi2g0420 817 PRINTS E-class P450 group I signature 386 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0420 817 PRINTS E-class P450 group I signature 610 627 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0420 817 PRINTS E-class P450 group I signature 749 759 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0420 817 PRINTS E-class P450 group I signature 759 782 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0420 817 PRINTS E-class P450 group I signature 630 656 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0420 817 PRINTS E-class P450 group I signature 672 690 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0420 817 PRINTS E-class P450 group I signature 713 737 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0420 817 MobiDBLite consensus disorder prediction 43 76 - -
Vvi2g0420 817 Pfam Cytochrome P450 359 806 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0420 Vvi-Chr2 3513982 3520687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0420 351 813 Cytochrome P450 AT2G45550 40.671 9.77e-117 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0420 - - vvi:100247960 1003.43