Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0400 ATGTCAATTCCAAAAGAGGATATAATATCAGAACAGAGGGTATATGAACTCCTCTCCTTTATGTTCTGGACTATAACCATCATTCCTCTGCTGAAGTATGCCTTCATAGTATTGAGAGCTGATGACAATGGAGAGGGCGGTCTTTTTGCTTTATACTCATTGCTTTGCCGGCATGCCAAAGTGGGTCTGCATCCAAATGATAGAAGTGCTAATGAAGTTATGAAAAGCATAAGTGCACTTGCTTCTAAGACCAAAGTGGAATCAGGAGCCAGAAGGGCCATTGAAAAACATAAAAGCAGTCACTATTTGATGTTGTTTTTGGCCCTATTCGGGTCTTGCATGATGTACCTGATGAATTTGAGAGATTATTACAGCCATGAAGTGGATGACGCCTTCCTCACCTTTGCATGGCAATACGTGGCCTTCACAAAACCCATACCCGTCACCACGCCCCACATCATCCATTTTCATTCCATCATCTAA 483 0.4224 MSIPKEDIISEQRVYELLSFMFWTITIIPLLKYAFIVLRADDNGEGGLFALYSLLCRHAKVGLHPNDRSANEVMKSISALASKTKVESGARRAIEKHKSSHYLMLFLALFGSCMMYLMNLRDYYSHEVDDAFLTFAWQYVAFTKPIPVTTPHIIHFHSII* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0400 160 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 10 115 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi2g0400 160 Pfam K+ potassium transporter 8 116 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0400 Vvi-Chr2 3329622 3330104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0400 10 115 Inorganic Solute Cotransporters AT1G70300 49.107 1.24e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0400 K03549 K12236 vvi:100268010 215.312