Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0385 ATGGCGTCAGATTTGACGGCACTGGATAGTCCACGTGTCGACCCCACAAGATGCCCGGAGATTCATGGATGGCGGAATCCCGCAGGACGCCACTCTCAAATATTGACCGCTCGCCGCCATCCTACGTGGAAATCGTTCGCTGCTCTCCTCCTATATATATATATATATATATATATATATCTGCCATTTCTCTTATTGTTGTGCACACATTCTTTTAAAGTTGAAGCTGATATGGAAACCCTAACCCTAACCCTAACTGGTTTGTTGAAGCAGAAGGCTGAGGAGTTCCCCTCCCGCCGTGCGCTTTCGGTCTCGGGAAAACTCGATCTCACCCACGCTCGATTGGATGAGCTTATTGATAAGGCCGCCTCTCTTCTCCTCGCGTCCGGCATCAACCCCGGCGATGTCGTCGCTCTCACCTTCCCAAACACCATCGAGTCTGTGGTGGTGTTCTTGGCTGTAATTCGATGTCGAGCCACCGCTGCGCCGCTAAACTCCGCGTACACCACCGAAGAGTTCGAGTTTTACCTATCCGACTCAGAATCGAAGCTTCTGGTGACATCACAAGAAGGAAACCAACCGGCTCAAGCCGCCGCTTCAAAGCTGAAAATCCCTTGCATCACAGCCACTGTCTCCGACACCGGAGATGACGTCATTCTGAGTGATTACAACTCTGATTTGAAGTCCAATTCGATTAATAGCATCGTCAATGACCCTGCCGACGTGGCACTCTTTCTTCACACCTCTGGGACGACGAGTCGACCCAAGGGCGTGCCTCTGACTCAGCTCAACCTCGCATCCTCCGTCCGGAACATCAAATCTGTTTACAAACTCACTGAGTCGGACTCGACCGTCATCGTCCTCCCACTGTTCCATGTTCACGGCTTGCTCGCCGGTTTATTGAGCTCCCTCGTCGCCGGAGCCGCCGTGACTCTCCCCTCGGCTGGGCGATTCTCTGCTTCGACGTTCTGGTCAGACATGATCGCGTACAAGGCCACGTGGTACACCGCTGTCCCTACGATTCACCAAATCATCCTCGATCGCCATCTAAGCAAGCCCGAGCCGTCTCTCCCTAAACTGCGCTTCATCCGCAGCTGCAGCGCATCCCTCGCACCGTCAATACTCGCTCGGCTTGAGGAGTCATTTGGCGCCCCGGTCCTTGAGGCTTACGCCATGACGGAAGCGACTCACCTCATGGCATCGAACCCGTTACCCGAAAACGGTGAGCACAAACCCGGTTCGGTGGGCAAACCGGTTGGGCAAGAAATGGCAATATTGGACGAGAATGGTGTGTTGCAACAACCTAACGTCAGTGGTGAGGTGTGCATAAGGGGCCCAAATGTTACCAAGGGCTACAAAAATAATCCTGAGGCTAACAAGGCTGCTTTCAGTTTCGGGTGGTTTCACACTGGAGATGTCGGGTTTCTGGACTCCGATGGATATTTGCATCTTGTTGGGCGAATCAAGGAGCTTATCAACAGAGGAGGGGAGAAGATATCGCCAATTGAAGTAGATGCGGTGCTTCTGTCTCATCCGGACGTTGCCCAAGGTGTTGCATTTGGAGTCCCTGATGACAAGTATGGGGAAGAGATAAATTGCGCCATAATTCCTAGAGAAGGGTCTGACTTGGACGAATCAGAGGTGCTGCGGTTTTGCAAGAAGAATTTGGCAACTTTCAAGGTTCCAAAGAAGGTATTCATGACCGACACTCTCCCGAAAACAGCTACTGGGAAGATCCAGCGTCGACTCGTGGCAGAGCATTTTCTTGCTCAAATCTCCACAGCCAAAATCCCCAAATTTGGTGCTTAG 1809 0.5207 MASDLTALDSPRVDPTRCPEIHGWRNPAGRHSQILTARRHPTWKSFAALLLYIYIYIYIYLPFLLLLCTHSFKVEADMETLTLTLTGLLKQKAEEFPSRRALSVSGKLDLTHARLDELIDKAASLLLASGINPGDVVALTFPNTIESVVVFLAVIRCRATAAPLNSAYTTEEFEFYLSDSESKLLVTSQEGNQPAQAAASKLKIPCITATVSDTGDDVILSDYNSDLKSNSINSIVNDPADVALFLHTSGTTSRPKGVPLTQLNLASSVRNIKSVYKLTESDSTVIVLPLFHVHGLLAGLLSSLVAGAAVTLPSAGRFSASTFWSDMIAYKATWYTAVPTIHQIILDRHLSKPEPSLPKLRFIRSCSASLAPSILARLEESFGAPVLEAYAMTEATHLMASNPLPENGEHKPGSVGKPVGQEMAILDENGVLQQPNVSGEVCIRGPNVTKGYKNNPEANKAAFSFGWFHTGDVGFLDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDVAQGVAFGVPDDKYGEEINCAIIPREGSDLDESEVLRFCKKNLATFKVPKKVFMTDTLPKTATGKIQRRLVAEHFLAQISTAKIPKFGA* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0385 602 ProSitePatterns Putative AMP-binding domain signature. 245 256 IPR020845 -
Vvi2g0385 602 Gene3D - 77 487 IPR042099 -
Vvi2g0385 602 SUPERFAMILY Acetyl-CoA synthetase-like 44 592 - -
Vvi2g0385 602 PANTHER ACYL-COA SYNTHETASE 79 591 - -
Vvi2g0385 602 Pfam AMP-binding enzyme C-terminal domain 503 578 IPR025110 -
Vvi2g0385 602 Gene3D - 488 591 IPR045851 -
Vvi2g0385 602 FunFam 4-coumarate--CoA ligase 2 490 591 - -
Vvi2g0385 602 Pfam AMP-binding enzyme 90 494 IPR000873 -
Vvi2g0385 602 FunFam Peroxisomal-coenzyme A synthetase 84 487 - -
Vvi2g0385 602 CDD FACL_fum10p_like 97 586 IPR045310 GO:0016874
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0385 Vvi-Chr2 3194042 3196274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0385 84 592 Monolignol Biosynthesis Gene Families AT4G05160 29.468 2.06e-56 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0385 K22133 - vvi:100253117 1008.82