Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0381 ATGAAGCTCAAAATCTATGCCGATCGGATGTCTCAGCCATCTCGTGCTATCATCATCTTCTGCAAGGTTAATAGAATTGATTTTGAGGAGGTCAGAGTTGACCTGGCAAAGCGTCAGCATCTTTCCCCTGATTTTAAAGTGGTAAACCCTATGGGGCAAGTTCCAGCAATAGTTGATGGAAGATTTCAGCTGTTTGAGAGCCATGCAATTCTTATCTATCTTGCTTGCGCATTTCCTGGAATTGCCGATAATTGGTACCCAAATGATCTTTTCAAGAGAGCTAAGATCCACTCAGTGTTGGATTGGCATCATTCCAACTTACGTCGTGGTGCAGCCCCATTTCTTCTAAATACTGTACTGGGACCTGCACTTGGCATTAAAGTGAATCCGCAAGCAGCTGCTGAAGCTGAGAAACTCTTGTTCTCGTCTCTGTCAAAAATTGAATCCTTTTGGCTGGAGGGGAATGGGAAGTTCTTGCTTGGAAGCTCTCAACCATCTGTAGCAGATCTCAGCTTGGTTTGTGAAATTATGCAACTAGAGATTTTGGGCGATAGGGAACGCAATCGGATATTAGGCCCATACAAGAAGGTTCAGCAGTGGATTGAGAATACTAAAAATGCAACTAGGCCTCATTTTGATGAAGTACATGCACTCCTTTTTGGATTCAAAGCAAGGCTACAAAAGCCACCGTCAGGGAGGGCAATCAATGAGGCAAGCAAAAAAAGGGCATTGCATTCAAAGATGTGA 747 0.4364 MKLKIYADRMSQPSRAIIIFCKVNRIDFEEVRVDLAKRQHLSPDFKVVNPMGQVPAIVDGRFQLFESHAILIYLACAFPGIADNWYPNDLFKRAKIHSVLDWHHSNLRRGAAPFLLNTVLGPALGIKVNPQAAAEAEKLLFSSLSKIESFWLEGNGKFLLGSSQPSVADLSLVCEIMQLEILGDRERNRILGPYKKVQQWIENTKNATRPHFDEVHALLFGFKARLQKPPSGRAINEASKKRALHSKM* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0381 248 CDD GST_C_Theta 92 222 IPR040077 -
Vvi2g0381 248 Gene3D - 82 243 - -
Vvi2g0381 248 SUPERFAMILY Thioredoxin-like 1 87 IPR036249 -
Vvi2g0381 248 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Vvi2g0381 248 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 230 IPR010987 -
Vvi2g0381 248 FunFam Glutathione S-transferase theta-1 83 230 - -
Vvi2g0381 248 SFLD Main (cytGST) 1 220 - -
Vvi2g0381 248 CDD GST_N_Theta 3 78 IPR040075 -
Vvi2g0381 248 Gene3D Glutaredoxin 1 81 - -
Vvi2g0381 248 SUPERFAMILY GST C-terminal domain-like 83 217 IPR036282 -
Vvi2g0381 248 SFLD Main.4: Theta-like 1 220 - -
Vvi2g0381 248 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vvi2g0381 248 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 247 IPR043377 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0381 Vvi-Chr2 3156867 3161486 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0381 1 228 Glutathione S-transferase Gene Family AT5G41210 72.368 3.40e-128 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0381 K00799 - vvi:100242689 500.36