Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0367 ATGGGTTTCTGTAGTAAACAGCCCAAAAGAGATCAACCTTCAACCAATTACAGATATAAGTCACTCAAGCAGGCATCTTTTGAGTTTGTCCATGAAGATTATGGCGGCACTCTCCCTGATAATGATAATAGAAGAGCTAAAGTAATGGAATCCAAGTCTTGTGAGATTCTGAGCACAGCCGAGCTCATCTCAGCAGTTGGCCAAATATGGGATTGTGCAAGCCGTCCGCTTTCTATTTTCCAACCCAAAGCAAATTCAAAACACAATGACACGGACAGTAATAAAGAGAAGGTATTATGTTATCTTGGTGGAGAAGGATATGTCAGGGTACCTACTTCAGCCAATAGTAAATACTTCTGCATTGATTTGAAGACTGCTAGCCTTTTTTCACCCATGGTGCAGCCAAACATTGAGCATTTAAATATAACCCAAAAAATGTCTTTGTTTGAACCTGGTAATGGAAACAATGCACATTCTTTTTTCTTGAGATGTCTGCGTGGTGGTGCCAACATGCCTAATGAGACTTGGAAGGAAATGGGGCTTACAAATGTAGGAATCTCATATGATTTGGGAAATATATATAGATGGATGAGTAAAATAACTCTTGATACACTAAGATCTCCGGTTGATATTACCCAAATTGAGAACATGAAAACTAAAGAATGTTGCATTTCAAAAGATGCAACTAATACTGCAGGTTGCGGAATTAACATTGATGTCGCTATCCCTGCAAATCACCCGGCCACTGAAAGTGCTGACTGTTATACTGGTGTTACAGAAGGTAATGGGGCAAATGAAAGGGTGATGAATATAGGGGTGTCTATTAGCTCTTTGTGCACAGACTATTTCCTTGGGGCTGACCATGGTATAGCAGCTGGTGATAGTATTTCTAGAACCCCAAGTTCTGAACTTCATGCAGACTCTAATTTCTTGTCATCCACTGATTTTGCTTTTGAAGAATGTCAACACAAAACAGAGGGTGTTGATCGACAGAAAGAGTTTGTCACTAAGGATAAACTGAAAATGGAAACTTGCCCATCAAAACAGGATAAACATCATTATGTGCTTGCAAAACAAGAGCATGCTTTTGCAGGAGCATTCGCTGGAGTATTTGTTAGCCTTTGCCTGCACCCTGTAGATACAATTAAGACTGTCATTCAATCTTGTCAGGCAGATCAGAAGTCTATCTTCTCTGTTGGAAGATTAATTATTTCTCAAAGAGGTTTAGCAGGATTTTATCGTGGAATTACTAGCAATATTGCTTCTTCAGCACCAATTTCTGCAGTTTATACCTTTACATATGAATCGGTGAAAGGAGCTTTGCTTCCTCTTTTTCCCAAGGAATGTCACTCTATTGCACACTGCATGGCAGGTGGTTGTGCAAGCATTGCTACTTCTTTCATTTTTACTCCCAGTGAGCATATAAAGCAACAGATGCAAATTGGTTCACACTATCAAAACTGCTGGAATGCTTTGGTTGGAATTATTAAAAAGGGCGGTTTGCCTTCACTATATGCGGGTTGGGGGGCTGTGCTCTGCCGAAATGTTCCACACTCTATCATTAAGTTTTACACATATGAAAGCTTGAAGCAATTGATGTTGCCATCACTGCAGCCTAATGCCAAACCCAACACATTACAGACGCTAGCTTGTGGAGGACTCGCTGGGTCTACTGCTGCTTTTTTTACTACTCCTTTTGATGTGGTGAAGACAAGATTACAGACACAGATTCCTGGATCCATGAAACAATATAATAGTGTGTTTCACACACTTCAAGAAATAAGCAAGCATGAAGGGTTGAGAGGTCTCTACAGGGGATTAACTCCGAGACTGGTAATGTATGTGTCACAAGGAGCGCTCTTTTTTGCATCATATGAATTTTTCAAGAGTTTATTTTGTTTGGAGATGCCAAAACTTCATGCACAAACGATCCCGCACAAGCAATACATGGAAGGTGATTCAACATCATCATTGCCGTCTGCACCATCATGA 1992 0.4031 MGFCSKQPKRDQPSTNYRYKSLKQASFEFVHEDYGGTLPDNDNRRAKVMESKSCEILSTAELISAVGQIWDCASRPLSIFQPKANSKHNDTDSNKEKVLCYLGGEGYVRVPTSANSKYFCIDLKTASLFSPMVQPNIEHLNITQKMSLFEPGNGNNAHSFFLRCLRGGANMPNETWKEMGLTNVGISYDLGNIYRWMSKITLDTLRSPVDITQIENMKTKECCISKDATNTAGCGINIDVAIPANHPATESADCYTGVTEGNGANERVMNIGVSISSLCTDYFLGADHGIAAGDSISRTPSSELHADSNFLSSTDFAFEECQHKTEGVDRQKEFVTKDKLKMETCPSKQDKHHYVLAKQEHAFAGAFAGVFVSLCLHPVDTIKTVIQSCQADQKSIFSVGRLIISQRGLAGFYRGITSNIASSAPISAVYTFTYESVKGALLPLFPKECHSIAHCMAGGCASIATSFIFTPSEHIKQQMQIGSHYQNCWNALVGIIKKGGLPSLYAGWGAVLCRNVPHSIIKFYTYESLKQLMLPSLQPNAKPNTLQTLACGGLAGSTAAFFTTPFDVVKTRLQTQIPGSMKQYNSVFHTLQEISKHEGLRGLYRGLTPRLVMYVSQGALFFASYEFFKSLFCLEMPKLHAQTIPHKQYMEGDSTSSLPSAPS* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0367 663 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 330 635 - -
Vvi2g0367 663 Gene3D Mitochondrial carrier domain 449 658 IPR023395 -
Vvi2g0367 663 Gene3D Mitochondrial carrier domain 329 448 IPR023395 -
Vvi2g0367 663 SUPERFAMILY Mitochondrial carrier 360 628 IPR023395 -
Vvi2g0367 663 ProSiteProfiles Solute carrier (Solcar) repeat profile. 543 631 IPR018108 -
Vvi2g0367 663 FunFam Mitochondrial substrate carrier protein-like 482 645 - -
Vvi2g0367 663 Pfam Mitochondrial carrier protein 360 441 IPR018108 -
Vvi2g0367 663 Pfam Mitochondrial carrier protein 450 533 IPR018108 -
Vvi2g0367 663 Pfam Mitochondrial carrier protein 544 632 IPR018108 -
Vvi2g0367 663 ProSiteProfiles Solute carrier (Solcar) repeat profile. 449 532 IPR018108 -
Vvi2g0367 663 ProSiteProfiles Solute carrier (Solcar) repeat profile. 356 440 IPR018108 -
Vvi2g0367 663 FunFam S-adenosylmethionine carrier 1, chloroplastic/mitochondrial isoform A 330 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0367 Vvi-Chr2 2990942 2995888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0367 348 632 Chloroplast and Mitochondria Gene Families AT1G07030 32.653 1.42e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0367 - - vvi:100853340 1345.49