Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0366 ATGAATCCCCTGTCAGAATTACATATAAGTGAAAATGGAAGTTTTAAAAACTCAAATGAAGGTTACAACCCAGAAGTTGCTGAACAAATGGAAAGTTTTGATGGAACGATAGAGGGTAACCTGAGCCAGAGAACACAATTAGTGGAGTGGCTAAATGGTATACTTCCTTATTTAAGTTTGCCATTGGAGGCTTCAGAGGAGGACCTAAGAGCATGTTTAATTGATGGCACTGTTCTATGTGGCATTTTGAACAGGCTGAGTCCTGGTTCCATTGAAATGGGAGGCATCTCCGAGTCATATTTGGAGAATCTCAAAAGGTTTTTGGCAGCTATGGAAGAGATGGGACTACCAAGATTTGAACTATCTGACCTAGAACAGGGATCAATGGATGCAGTTCTCCAGTGTCTTCAGACACTTAGAGCACATTTTAATTTTAATATTGGGGGAGAGAACATTCGGAATTATTCAAGAAAGAAATGGAATTTGTGCGAGGTAGAATGTTTGGAGGGATTTGATCGTTCTCAAGGAGATGCATCTTCCCATGGAGAACACTCTGATGAATTTGTAGAAGAGAGGAGGAATTCACTGGACTCTAAATTTCAACATGTTTTGCGTCGTTCTGTTTTCTCAGAGCCATTGGCTGCATCAATACATCATGTTGGACATAGGTTCCAGGAGGGGTTCCAATTGAAGCAAGGGGGTTATGCTGATTTTCCTGCTGCTAAAATTTCTGAATTAGTGGAACAAAAAAGTCTAGAAAACACCCCAACTCATCTGCTTTTCAGCATTCTGATCAATATTCTGGATGGAAGCATTGAAAGAAAGAATGGGGATGTACCTCATCGAGTTGCATTTCTGTTGAGGAAAATTATCCAAGAGATAGAGCAGCGAATTTCTACTCAAGCAGAAAACTTAAAAAATCAAAACAATCTTTATAAGGCTCGTGAAGAGAAGTATCAATCAAGAATAAGAGTACTTGAAACCCTTGCAACTGGGACCACTGAAGAAAATAGGGTTGTTATGCACCAGCTGCAGCAAATAAAGATTGAAAATACCAAAATAGAAGAGAGGAAAAAACTTGAAGAGCAGGATGTGGATAGATTAATGAAGGAGAAGGATCGTAGTGATAATGAGATTTTGGCACTTAAAGAGGAACTTGAAATGGCCAGAAAGACACATGAGAAACATTGCTTGCAATTGGAAACACAAGCTAAGGAAACCAAAGTCGAATTGGAGAAAAAATTAAAGGAGCTTGAGAATCTTCTAACAGATTCAAAGAAGAAGGTGAAAGAACTGGAGGCATTTTCTGAATCCAAATCTCGAAGATGGAAAAGGAAAGAACTCAGATACCAGAATTTTGTAGATTCTCAATTTGGAGCTTTGCAGGAATTGAGGGTGGCTTCTGACTCCATAAAGCGAGAAGTTTTGAAGACACACAGGACTTACTCTGAGGAATTTAATTACTTAGGAATGAAGCTTAAGGGTCTAACTGAGGCTGCTGAAAACTACCATATGGTTCTGGAAGAAAATCGGAGACTGTATAATGAGGTTCAAGATTTGAAAGGAAATATTAGGGTGTATTGTCGGATAAGGCCATTCCTTCCAGGGCAAAGTGAAAAGTATACAACCATAGAATATATTGGTGAGAATGGGGAATTGGTCATTGTAAATCCTGCAAAACAAGGAAAAGATAGCCGTAGGCTGTTCAAGTTCAATAAGGTGTTTAGTCCAGCAGCCACTCAAGAGGAGGTATTTTTAGACACTCAACCATTAATTCGATCTGTACTTGATGGATACAATGTCTGTATATTTGCCTATGGTCAAACTGGCTCTGGAAAAACCTATACTATGACTGGGCCTGATGTATCTTCCAAAGTGGACTGGGGGGTTAACTATCGAGCTTTGAACGATCTTTTCCATATCTCTCAGAGCAGAAAAAGTTCCATCATGTATGAAGTCGGTGTCCAAATGGTTGAGATATATAATGAACAAGTGCGAGATTTGCTCTCGAGTGATGGTTCTCAGAAAAGACTTGGGATTTGGAGTACCACTCAACCAAATGGTTTAGCTGTCCCTGATGCAAGCATGCACCCTGTTAAATCAACCGCAGACGTACTGGAATTAATGAATATTGGATTAATGAATAGGGCTGTAGGAGCCACTGCGCTAAATGAGAGAAGTAGCCGATCTCACAGCATTCTCACTGTTCATGTTCGCGGCTTGGACTTGGAGACTGATGCTGTTTTGCGTGGAAGTTTACATTTGGTAGACCTTGCAGGCAGTGAAAGAGTACTTCGCTCTGAAGCAACTGGGGACAGGCTTAGGGAAGCACAGCACATAAACAAATCACTATCAGCTCTTGGAGATGTAATATTTGCTTTAGCACAAAAGAGTCCTCATGTGCCATACAGAAATAGCAAACTAACTCAAGTCCTTCAAAGCTCTTTGGGAGGTCAAGCGAAGACCCTTATGTTTGTACAGCTTAATCCTGATGTGGATTCCTACTCCGAAACTATAAGTACCTTGAAGTTTGCCGAGAGAGTCTCTGGTGTTGAGTTAGGTGCTGCAAGGAGCAACAAAGAGGGAAGGGATGTTAGAGAACTTATGGAGCAGGTGGCATTCCTCAGGGACTCAAATGCTAAAAAGGATCTGGAGATTGAACAGTTGCAGCAGGTTAATGTCAACTCCACTAGTGGAAAACGTGGTATGAACTCACTAAGGTATGGGTCTTCTTCTCCAAGAAGACATTCCATTGGGGCTTCTCGTCAAAGTCACAGGCTGCCACAAGGCAAAGGCTCAGGTCTTGTTCAAAAAGCGGCTTCTGATCTGGACAATTGCTCAGAGTACAGTGACAAGCATTCTGAAGCAGGTTCTTTGCCATCAATCGATGATTTTAGACATAAGGAATGTTTTGCCCAGTCCAAGCTTGCTGGGGGAGATGTAGGCCAGAATTTTACTGAAGACATTGAGCTATTAGGATTTGGGGATGCAGATTCTGAGGAGAGATTAAGTGATATATCTGATGGGGGCCTGTCAATGGGAACAGAAACTGATGGTTCAATCAGCAGTATTGTGGAGTTCACACTTTTCCCCGAAGCTGTAAAACCAGCAGAGAACACAGAGAAGATAGAGAAGTTGACCATGCCATCTAAACTTCCCAGGATCCCCCAGAAGCAGGGTCCATTGAGGTCTTCTCGGTTGCCATCGTCAAGCAAGAGTGCCTCGAAGGTTGCATCAAGTTCTAGGAAAACCCCTGCTGTTGCCAGCTCATCCTCGACCAAGCTCACCAAAAGATGGCAGTAA 3303 0.4178 MNPLSELHISENGSFKNSNEGYNPEVAEQMESFDGTIEGNLSQRTQLVEWLNGILPYLSLPLEASEEDLRACLIDGTVLCGILNRLSPGSIEMGGISESYLENLKRFLAAMEEMGLPRFELSDLEQGSMDAVLQCLQTLRAHFNFNIGGENIRNYSRKKWNLCEVECLEGFDRSQGDASSHGEHSDEFVEERRNSLDSKFQHVLRRSVFSEPLAASIHHVGHRFQEGFQLKQGGYADFPAAKISELVEQKSLENTPTHLLFSILINILDGSIERKNGDVPHRVAFLLRKIIQEIEQRISTQAENLKNQNNLYKAREEKYQSRIRVLETLATGTTEENRVVMHQLQQIKIENTKIEERKKLEEQDVDRLMKEKDRSDNEILALKEELEMARKTHEKHCLQLETQAKETKVELEKKLKELENLLTDSKKKVKELEAFSESKSRRWKRKELRYQNFVDSQFGALQELRVASDSIKREVLKTHRTYSEEFNYLGMKLKGLTEAAENYHMVLEENRRLYNEVQDLKGNIRVYCRIRPFLPGQSEKYTTIEYIGENGELVIVNPAKQGKDSRRLFKFNKVFSPAATQEEVFLDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPDVSSKVDWGVNYRALNDLFHISQSRKSSIMYEVGVQMVEIYNEQVRDLLSSDGSQKRLGIWSTTQPNGLAVPDASMHPVKSTADVLELMNIGLMNRAVGATALNERSSRSHSILTVHVRGLDLETDAVLRGSLHLVDLAGSERVLRSEATGDRLREAQHINKSLSALGDVIFALAQKSPHVPYRNSKLTQVLQSSLGGQAKTLMFVQLNPDVDSYSETISTLKFAERVSGVELGAARSNKEGRDVRELMEQVAFLRDSNAKKDLEIEQLQQVNVNSTSGKRGMNSLRYGSSSPRRHSIGASRQSHRLPQGKGSGLVQKAASDLDNCSEYSDKHSEAGSLPSIDDFRHKECFAQSKLAGGDVGQNFTEDIELLGFGDADSEERLSDISDGGLSMGTETDGSISSIVEFTLFPEAVKPAENTEKIEKLTMPSKLPRIPQKQGPLRSSRLPSSSKSASKVASSSRKTPAVASSSSTKLTKRWQ* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0366 1100 Gene3D - 35 144 IPR036872 -
Vvi2g0366 1100 MobiDBLite consensus disorder prediction 1062 1100 - -
Vvi2g0366 1100 PRINTS Kinesin heavy chain signature 598 619 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0366 1100 PRINTS Kinesin heavy chain signature 721 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0366 1100 PRINTS Kinesin heavy chain signature 752 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0366 1100 PRINTS Kinesin heavy chain signature 801 822 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0366 1100 SMART kinesin_4 521 859 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0366 1100 Pfam Calponin homology (CH) domain 42 144 IPR001715 GO:0005515
Vvi2g0366 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 523 888 IPR027417 -
Vvi2g0366 1100 ProSiteProfiles Calponin homology (CH) domain profile. 41 144 IPR001715 GO:0005515
Vvi2g0366 1100 MobiDBLite consensus disorder prediction 895 930 - -
Vvi2g0366 1100 SUPERFAMILY Calponin-homology domain, CH-domain 42 143 IPR036872 -
Vvi2g0366 1100 ProSiteProfiles Kinesin motor domain profile. 523 851 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi2g0366 1100 PANTHER KINESIN-LIKE PROTEIN KLP-3 359 1070 IPR027640 GO:0003777|GO:0007018
Vvi2g0366 1100 MobiDBLite consensus disorder prediction 1 21 - -
Vvi2g0366 1100 Coils Coil 344 435 - -
Vvi2g0366 1100 MobiDBLite consensus disorder prediction 895 938 - -
Vvi2g0366 1100 MobiDBLite consensus disorder prediction 1040 1100 - -
Vvi2g0366 1100 SMART ch_5 43 142 IPR001715 GO:0005515
Vvi2g0366 1100 Gene3D Kinesin motor domain 465 853 IPR036961 -
Vvi2g0366 1100 Coils Coil 291 322 - -
Vvi2g0366 1100 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 465 853 - -
Vvi2g0366 1100 ProSitePatterns Kinesin motor domain signature. 751 762 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi2g0366 1100 Pfam Kinesin motor domain 529 849 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0366 Vvi-Chr2 2979275 2987744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0366 511 882 Calmodulin-binding Proteins AT5G65930 39.947 6.47e-73 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0366 K10406 - vvi:100256435 2105.49