Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0360 ATGTCCTCCGGGCAGTGCATAAAGAAGCAGATCGCCCCTATCAAAGTGGGACACCTACAACCAGAATTTGTTGGTCTGTCGTCAAAAAGTCAAAAAAAGGCTAGCAAGGATCATCCTAGAGCTCGTGATATACCCGTTCATGGTTGGAAAAATTTAGCCGGCTCGAGACATGAGAGACTTACTCAACCAAATAGAGGTCATGGTGTTGGCAATAAGAAAAGTGTTACTGGTTCAAAGCACGACCAATTTAATGAGGTCAACCTCCTACTAGCTCAGAAAAGTGAAGCAGCTGAGGCCTTTGTGAATCAGAAGTTATTTGTTGGTAAATATCTTAGCAAAGATGGGGCAAATCACCGGTCCAAACAATTCTTGGATGCTTTAGAGGTTTTAAATTCAAACAAGGAATTATTTCTGAAGCTCCTTGAAGATCCGAATTCTCTGTTAGTGAAACACATCCAAGACTTACGAGATTCTCAGACAGGGAAAGAACCAGCTAAATCACTCTCAGGAGACAGAAGGTCAGAATGTGGACTTAGTAATGCAAAGCAGCAGGAAGGAGCTGAGCATACTCGAAAGTCACAGAAGAAAAATGGGCACAACCTTTTCTGGAAAAAGATCAAGTGGGATAGATACTCATCAAAAGGGAGTAGCAATCATCAACCTTCACATACAATAGAAGTTTCCAAACCATGCCTAACAAGAGCACAGAATTTTGAAAGCAGAACAAGACTGTTTCCCTCCCAGCAACATCAATACGGCTTGAGAGATGGTTCGCAGAATGGTAGAAGTAGATCGGAACATGCTATGGTGGAAAACAGAAAAGAGCAGCATTGTAATCCAATGGATGATGCTTTGTGCAAACCTCCTTATTATGACCTCCGAGGCTCAGAGTTTGTTGGAAAATGGATTGGTGGGAAGATTGTTGGAAGAAGTTCATCGAGTTCAGCCAAACTGGACATTGGAAATACTGCCAAATCTTCCACCGATATCAAGAGGAGGAAGAACATAGGCAAGCCTAAGGATTTTGGGCTGAGCATTCAACATGAAACTGGTTCAACCAGTGGAAGCGGTTCTAAAAGTTTGAAAATATCAGCTGCCAAGTACTCAAAGCAAAAAGAATCTAGCATATACGCTGAGGCTAAAAGACATCTGTCTGAGATGTTAAGCAATGAAGATAAGGATGAGTTCTTTTCCACCAAACAAGTCCTGGGACCTTTGGGGACGATACTCTCTTTGCCTGGATATGACCTATCTTCTAAGCTCAGTCCTCGGTGGGAAACAGAACATGGTTTTGTGACTGCAGAGATGCGATTTTCCCCTTACAGCAATTTTCAAGCAGACCTTCAGAACAGGCAGTTGCTTCAAAAAGAAAAGAACAAAACTAGCCACCCAAGTCCATTGGGGCAGAATCCAGAGGATCCACCATGTGCTAATATCAAGAAACCCATTGATCAGTTGCAAGTTCCTGACTCAAAGACAAATTTTCCACATCTTCTTTCTGATGCCAAACTCCATGAAAGCATCTGTTCCATTAGAGACGATAGTAGTTGGGAAGGCGATGTGAATATTTTAAAAACACATGATACAATACATTTAGGAGAAAGTAATTGTTTGGAACGGCCCTTGGGACTGAGTAGCAGACCTGAAACCAGATCTAAACGATGCACTGATGCCACCAGTGTGCGTGAGGAAAATGAGTATCTGGAGTTCTCTGGACCGGATGTACTTTTAGAGGATCAATCGCAAACATTTTCATTAGGTGTTCCTCCATCGAGCCCTTCTTCAAGCGTCCAGGAAACAGAAGATTTGGAAGGAATTAAACATAGAGCAGATCAGACCAGTCCAGTATCTGTCCTGGAGCCATTTCCCATGGAAGATGTCACTAGCCCCTCAAGCATCATTTCTAAACATGATGACCTGCCAATGCAACTAGAAATTACTTTTGATAAACATTGTTCTGCTTCGAGGATGTGTCCTTTGGATCCTGCAGTCAATTCAAACACCTGTATGGAAGACCATCAATTTGCTGATAAGTATGTCAGAGAAGTGATACAAGCTTATGGCTTGAACTGTGATGAACTCTTGGCAGATAGGCAGTCACCTATGGAGTACTGGAATGACCCTAAGCTCCTCTTTGATTGCATTAACGAAGTTGTTCTAGAGGTATACAACCGTTATTTTAGACACCTCCCTTGGCTATCATCTATCAAACCAAAGATCCAGCCAGTCCCATTAACGGAGAGAGACGTGGTTCGCGAAATAATGGAAGGTGTTGATTTGCGCCTTCTTCAGCCACGGGAAGTCCAGCTCCAAAGAGATGTGAAAAAATCTGGAGCATGGCTTGATATTCGAACCGATGTTGAAGATATTGTTATCAATATAGTGGAAACCAGCCTAGAAGCATTGATAGAAGAAACCATACTTGAGCAGCAAGCTTAA 2439 0.4244 MSSGQCIKKQIAPIKVGHLQPEFVGLSSKSQKKASKDHPRARDIPVHGWKNLAGSRHERLTQPNRGHGVGNKKSVTGSKHDQFNEVNLLLAQKSEAAEAFVNQKLFVGKYLSKDGANHRSKQFLDALEVLNSNKELFLKLLEDPNSLLVKHIQDLRDSQTGKEPAKSLSGDRRSECGLSNAKQQEGAEHTRKSQKKNGHNLFWKKIKWDRYSSKGSSNHQPSHTIEVSKPCLTRAQNFESRTRLFPSQQHQYGLRDGSQNGRSRSEHAMVENRKEQHCNPMDDALCKPPYYDLRGSEFVGKWIGGKIVGRSSSSSAKLDIGNTAKSSTDIKRRKNIGKPKDFGLSIQHETGSTSGSGSKSLKISAAKYSKQKESSIYAEAKRHLSEMLSNEDKDEFFSTKQVLGPLGTILSLPGYDLSSKLSPRWETEHGFVTAEMRFSPYSNFQADLQNRQLLQKEKNKTSHPSPLGQNPEDPPCANIKKPIDQLQVPDSKTNFPHLLSDAKLHESICSIRDDSSWEGDVNILKTHDTIHLGESNCLERPLGLSSRPETRSKRCTDATSVREENEYLEFSGPDVLLEDQSQTFSLGVPPSSPSSSVQETEDLEGIKHRADQTSPVSVLEPFPMEDVTSPSSIISKHDDLPMQLEITFDKHCSASRMCPLDPAVNSNTCMEDHQFADKYVREVIQAYGLNCDELLADRQSPMEYWNDPKLLFDCINEVVLEVYNRYFRHLPWLSSIKPKIQPVPLTERDVVREIMEGVDLRLLQPREVQLQRDVKKSGAWLDIRTDVEDIVINIVETSLEALIEETILEQQA* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0360 812 MobiDBLite consensus disorder prediction 156 170 - -
Vvi2g0360 812 MobiDBLite consensus disorder prediction 31 45 - -
Vvi2g0360 812 Pfam Protein of unknown function (DUF3741) 102 146 IPR022212 -
Vvi2g0360 812 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 5 809 - -
Vvi2g0360 812 Pfam Domain of unknown function (DUF4378) 659 805 IPR025486 -
Vvi2g0360 812 MobiDBLite consensus disorder prediction 457 480 - -
Vvi2g0360 812 MobiDBLite consensus disorder prediction 346 360 - -
Vvi2g0360 812 MobiDBLite consensus disorder prediction 334 360 - -
Vvi2g0360 812 MobiDBLite consensus disorder prediction 156 196 - -
Vvi2g0360 812 MobiDBLite consensus disorder prediction 26 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0360 Vvi-Chr2 2925929 2928646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0360 370 790 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 29.464 8.52e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0360 - - vvi:100247977 1620.91