Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0353 ATGTTAACCACCAACAAGAGTTCGGGCAGAGATGCCAATTTGTCATGCCAGGCGGAAGCAGCACTCCTAAGCGCAAAGAACTTCCATGTAACAAACTTCAACAAGTATCAGTACAATTCCTCAGATGAGAAAACCTTAGACCATCTGCATGCACTGTTGGCATCTGCAGTGTACCTTCAAGCTGTTAGCACCATCAGCCAGGCTTTAATATGTGTGACTCGCTCCAGGGGCTGGTCTTTCATGCAAAGAGAAAGACCTCGTCCTCGTCTTGTTTCTGCCTTTGTCGGTATTCAATTGGCCCCAACAGTGATATCTGCTACAGCATCATGGGAATTTGCTGGGATTAGAAAGATTGGCTGGGGTTGGACTGGTGTTATTTGGCTATACAACATTCTAACCTATATGTTGCTTGATCCTATCAAATTTGGTGTGCGATATGCTCTTAGTGGGAGAGCTTAG 459 0.4532 MLTTNKSSGRDANLSCQAEAALLSAKNFHVTNFNKYQYNSSDEKTLDHLHALLASAVYLQAVSTISQALICVTRSRGWSFMQRERPRPRLVSAFVGIQLAPTVISATASWEFAGIRKIGWGWTGVIWLYNILTYMLLDPIKFGVRYALSGRA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0353 152 PANTHER CALCIUM-TRANSPORTING ATPASE 26 149 - -
Vvi2g0353 152 SUPERFAMILY Calcium ATPase, transmembrane domain M 34 148 IPR023298 -
Vvi2g0353 152 Gene3D - 16 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0353 Vvi-Chr2 2853793 2870721 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0353 28 152 Primary Pumps ATPases AT3G60330 66.400 2.67e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0353 K01535 - vvi:100246127 227.639