Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0331 ATGTATTTGCAAAGCAGGACGCAACGCCCTTCACTCTCATTTTCAGTGATGATGAAGATTTTTGTGTTAGCCTCACTAGGCACCACCGTCCATCTTAATGTTTACTATGCTGGTTTACATTACACTTCCGCAACCGTTGCAAGTGCCTTGGGTAATGTTATTCCCGGTTTGACATTTCTCATGGCTGTTCTTTTTAGGATGGAAGAGGTGAGGATTCGAAGTGCAAGAGGTCGAGCTAAGGTGTTGGGAACAATGGTTTGCATTGGTGGGGCACTTACTTTTACCTTTTGGAAAGGAGGGTACCTGTTCAATGGCTTCACAGAAAGACCACTGATCAACGTCTACAGTACCAAAGGTTCCGCTAGTGAGCATCATGGTGGGAAAAACTGGATCAAAGGCTCAGTCCTCATTCTGATCAGCCATATTGCATGGAGCTCGTGGCTCATTCTCCAGGCTGTAGTGTACAAAGTCTACCCAGCTCGATTATCTCTGAATGTTCTTATCTGCTTCTTTGCTTCACTGCAATCTTCCTTCCTTGCCTTGATTTTTGCAAGGAATCCAGTCTTGTGGAAGCTAGAATGGAATGTGCAGCTCTTGACCATCATATACTGTGGAGTTGTGATCTCAGGATTGGTGTACTACTTGCAAACTTGGTGTATCAGTAAGAGAGGACCCGTTTTTGCAGCAATGTTTACTCCATTACTAGTTATTTTTGTGGGAATATTCTCAGCAGTTGCTTTTGCAGAGCGTCTTCACTTGAGCAGCTTGATAGGAGCATTTCTCATCATTGCTGGCCTTTACATTGTCCTGTGGGGTAAGAGGACAGATGGTCGCTCTGAAGGAATAAGTAAGAGTAAAAAAGGCTTGGATGATGATAAGGTACTGGAGATTTCTATAAATGATCAGCCTGGTACAAACCCCATCACAAATGAAAGGAAATGA 942 0.4363 MYLQSRTQRPSLSFSVMMKIFVLASLGTTVHLNVYYAGLHYTSATVASALGNVIPGLTFLMAVLFRMEEVRIRSARGRAKVLGTMVCIGGALTFTFWKGGYLFNGFTERPLINVYSTKGSASEHHGGKNWIKGSVLILISHIAWSSWLILQAVVYKVYPARLSLNVLICFFASLQSSFLALIFARNPVLWKLEWNVQLLTIIYCGVVISGLVYYLQTWCISKRGPVFAAMFTPLLVIFVGIFSAVAFAERLHLSSLIGAFLIIAGLYIVLWGKRTDGRSEGISKSKKGLDDDKVLEISINDQPGTNPITNERK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0331 313 Pfam EamA-like transporter family 10 74 IPR000620 GO:0016020
Vvi2g0331 313 Pfam EamA-like transporter family 132 270 IPR000620 GO:0016020
Vvi2g0331 313 SUPERFAMILY Multidrug resistance efflux transporter EmrE 14 95 - -
Vvi2g0331 313 SUPERFAMILY Multidrug resistance efflux transporter EmrE 179 274 - -
Vvi2g0331 313 PANTHER WAT1-RELATED PROTEIN 12 276 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0331 Vvi-Chr2 2660400 2661822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0331 5 306 Nodulin-like Gene Family AT2G37460 36.246 1.04e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0331 - - vvi:100260287 615.15