Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0330 ATGTATTTGCACAGCAGGACGCAACGCCCTTCACTCTCATTTTCAGTGATGATGAAGATTTTTGTGTTAGCCTCACTAGGCACCACCATCTTTCTTAATGTTTACTATGCTGGTTTACATTACACTTCTGCAACAGTTGCAAGTGCCTTGAGTAATGGTATTCCCAGTTTGACATTTCTTATGGCTGTTCTTTTTAGGATGGAAGAGGTGAGGATTCAAAGTGCAAGAGGTCGAGCTAAGGTGTTGGGCACAATGGTTTGCATTGGTGGGGCACTTACTTTTACCTTTTGGAAAGGAGGGTGCCTGTTCAATGGCTTCACAGAAAGACCACTGATCAACGTCTACAGTACCAAAGGTTCCGCTAGTGAGCATCATGGTATGAAAAACTGGATCAAAGGCTCAGTTCTCATTCTGATCAGCCATATTGCATGGAGCTCGTGGCTCATTCTCCAGGTGATATCTACTTCATTGAAAATAATAAGCCTGTATCACTATATATGTTATTTGTACCTAATCCATCGAAAGGAGCTCGGAACTTGGACACTGTTTTCACAGGCTGTAGTGTACAAAGTCTACCCAGCTCGATTATCTCTGAATGGTCTTATCTGCTTCTTTGCTTCACTGCAATCTTCCTTCCTTGCCTTGATTTTTGCAAGGAATCCAGTCTTGTGGAAGCTAGAATGGAATGTGCAGCTCTTGACCATCATATACTGTGGAGTTGTGGGCTCAGGATTGGTGTACTACTTGCAAACTTGGTGTATCAGTAAGAGAGGACCGGTTTTTGCAGCAATGTTTACTCCATTACTAGTTAGTTTTGTGGGAATATTCTCAGCAGTAGTTGCTTTTGCAGAGCGTCTTCACTTGAGCAGCTTGATAGGAGCATTTCTCATCATTGCTGGCCTTTACATTGTCCTGTCGGGTAAGAGGATAGATGGTCGCTCTGAAGGAATAAGTAAAGAGTAA 963 0.4278 MYLHSRTQRPSLSFSVMMKIFVLASLGTTIFLNVYYAGLHYTSATVASALSNGIPSLTFLMAVLFRMEEVRIQSARGRAKVLGTMVCIGGALTFTFWKGGCLFNGFTERPLINVYSTKGSASEHHGMKNWIKGSVLILISHIAWSSWLILQVISTSLKIISLYHYICYLYLIHRKELGTWTLFSQAVVYKVYPARLSLNGLICFFASLQSSFLALIFARNPVLWKLEWNVQLLTIIYCGVVGSGLVYYLQTWCISKRGPVFAAMFTPLLVSFVGIFSAVVAFAERLHLSSLIGAFLIIAGLYIVLSGKRIDGRSEGISKE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0330 320 SUPERFAMILY Multidrug resistance efflux transporter EmrE 14 95 - -
Vvi2g0330 320 Pfam EamA-like transporter family 178 305 IPR000620 GO:0016020
Vvi2g0330 320 Pfam EamA-like transporter family 7 74 IPR000620 GO:0016020
Vvi2g0330 320 SUPERFAMILY Multidrug resistance efflux transporter EmrE 213 309 - -
Vvi2g0330 320 PANTHER WAT1-RELATED PROTEIN 12 309 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0330 Vvi-Chr2 2656233 2658528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0330 2 313 Nodulin-like Gene Family AT5G07050 33.538 2.35e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0330 - - vvi:100246214 540.806