Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0329 ATGGATAAGGGACTAAATCAAATCGTCTTTGTGGTGTACAGACACATCATTGCCATGCTTTTGCTAGGTCCCTTTGCTTATGTACTTGAAAGGACGCAACGCCCTTCACTCTCATTTTCAGTGATGATGAAGATTTTTGTGTTAGCCTCGCTAGGCACCACCATCTTTCTTAATGTTTACTATGCTGGTTTACATTACACTTCTGCAACAGTTGCAAGTGCCTTGAGTAATGGTATTCCCAGCTTGACATTTCTCATGGCTGTTCTTTTTAGGATGGAAGAGGTGAGGATTCAAAGTGCAAGAGGTCGAGCTAAGGTGTTGGGAACAATGGTTTGCATTTGTGGGGCACTTACTTTTACCTTTTGGAAAGAAGGGTACCTGTTCAATGGCTTCATGGAAAGACCACTGATCAACGTCCACAGTACCAAAGGTTCCGCTAGTGAGTTGAATCATGGTGTGAAAAACTGGATCAAAGGCTCGGCCCTCATTCTGATCAGCAATATTGCATGGTGCTCGTGGCTCATTCTCCAGGTTGTAGTGTACAAAGTCTACCCAGCTCGATTATCTCTGAATGTTCTTATCTGCTTCTTTGCTTCACTGCAATCTTCCTTCCTTGCCTTGATTTTTGCAAGGAATCCAGTCTTGTGGAAGCTAGAATGGAATGTGCAGCTATGGACCATCATATACTCTGGAGTTGTGGGCTCAGGATTGGTGTACTACTTGCAAACTTGGTGTATCAATAAGAGAGGACCGGTTTTTGCAGCAATGTTTACTCCATTACAAGTTATTACTGTGGGAATATTCTCAGCAGTTGCTTTTGCAGAGCGTCTTCACTTGGGCAGCTTGATAGGAGCATTTCTCATCATTGCTGGCCTTTACATTGTCCTGTGGGGTAAGAGGACAGATGGTCGCTCTGAAGGAACAAGTGAGAGTGAAAAAGGCTTGCATGATGATAAGGTACTGGAGATTTCTGTAAATGATGAGCCTGGTACAATCCCCATCACAAATGAAAGGAAATGA 1020 0.4343 MDKGLNQIVFVVYRHIIAMLLLGPFAYVLERTQRPSLSFSVMMKIFVLASLGTTIFLNVYYAGLHYTSATVASALSNGIPSLTFLMAVLFRMEEVRIQSARGRAKVLGTMVCICGALTFTFWKEGYLFNGFMERPLINVHSTKGSASELNHGVKNWIKGSALILISNIAWCSWLILQVVVYKVYPARLSLNVLICFFASLQSSFLALIFARNPVLWKLEWNVQLWTIIYSGVVGSGLVYYLQTWCINKRGPVFAAMFTPLQVITVGIFSAVAFAERLHLGSLIGAFLIIAGLYIVLWGKRTDGRSEGTSESEKGLHDDKVLEISVNDEPGTIPITNERK* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0329 339 PANTHER WAT1-RELATED PROTEIN 1 303 IPR030184 GO:0016020|GO:0022857
Vvi2g0329 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 13 120 - -
Vvi2g0329 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 205 300 - -
Vvi2g0329 339 Pfam EamA-like transporter family 158 296 IPR000620 GO:0016020
Vvi2g0329 339 Pfam EamA-like transporter family 5 117 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0329 Vvi-Chr2 2652811 2654415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0329 1 328 Nodulin-like Gene Family AT1G75500 38.235 1.58e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0329 - - vvi:100241097 675.626