Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0328 ATGACTGTCGGAGTCCTAGTTCTGGTGGGGTCTCCAAGTGAAGCGAAATCCAGTCCTGGAAACCTTGTCAGAGGTATGAGAACTGTTTCTGGTAGCGCTACAGGTGGTACAAAAGATATACAAGAAATGCTTGACTTTTGTGCTGCACATGGAATTCACCCAGAGATCGAAGTAATTCCAATTCAGTATGCAAACGAAGCCCTTGAGAGGCTAATAAAGAAGGATGTGAAGTAG 234 0.4444 MTVGVLVLVGSPSEAKSSPGNLVRGMRTVSGSATGGTKDIQEMLDFCAAHGIHPEIEVIPIQYANEALERLIKKDVK* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0328 77 PANTHER ALDEHYDE REDUCTASE 3 77 IPR047109 GO:0016616
Vvi2g0328 77 MobiDBLite consensus disorder prediction 14 34 - -
Vvi2g0328 77 Gene3D - 55 77 - -
Vvi2g0328 77 Gene3D - 4 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0328 Vvi-Chr2 2643819 2644363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0328 4 77 Monolignol Biosynthesis Gene Families AT1G72680 68.919 6.39e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0328 K00083 - vvi:100244482 137.117