Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0327 ATGACTTCTGAAAGTGCAGATGACAACTGCTTAGCATGGGCGGCAAGAGATCCATCTGGCCTTCTATCACCTTACAAATTCAGCCGCAGGGCTCTTGGAAGTGATGATGTTTCATTGAATATCACACACTGTGGGGTTTGTTATGCTGATGTAGTCTGGACTAGGAATAAATTTGGAGACTCTAAGTATCCTGTGGTACCTGGACATGAGATTGCTGGAATTGTAAAAGAGGTTGGCTCAAATGTTCGTCGCTTCAAAGTTGGTGACCATGTTGGAGTGGGAACCTATGTCAACTCATGCAGGGATTGTGAGTACTGCAATGATGGACTTGAAGTTCATTGTGCGAGGGGGTCGGTGTTCACTTTTAATGGTGTTGATGTTGATGGTACGGTCACCAAAGGAGGTTATTCCAGTCACATTGTTGTTCATGAAAGGTACTGCTTCAAGATACCTGACAACTACCCATTAGCTTCAGCAGCACCTTTGCTATGTGCTGGAATTACTGTTTACACTCCCATGATGCGCCACAAGATGAACCAACCTGGTAAATCCCTCGGGGTGATTGGGCTAGGTGGTCTTGGTCACTTGGCTGTGAAGTTTGGCAAGGCTTTTGGATTGCGTGTCACAGTTCTCAGCACAAGCATATCCAAGAAAGAAGAAGCTCTGAATCTGCTTGGAGCAGACAAATTTGTGGTCTCATCAGACGAACAGCAGATGATGGCTCTTTCTAGATCACTCGACTTTATAATTGATACTGCATCAGGTGATCACCCATTCGATCCATACTTGTCTCTGTTGAAGACTGCCGGAGTCCTAGTTCTGGTGGGGTTCCCAAGTGAAGTGAAATTCAGTCCTGGAAGCATTGTCATGGGTATGAGAACTGTTTCTGGTAGCGCTACAGGTGGTACAAAAGATACACAAGAAATGCTTGACTTTTGTGCTGCACATGGAATTCACCCAGAGATCGAAGTAATTCCAATTCAGTATGCAAATGAAGCCCTTGAGAGGCTAATAAAGAAGGACGTGAAGTACCGTTTTGTGATTGATATTGAAAACTCTCTGAAGTGA 1068 0.4457 MTSESADDNCLAWAARDPSGLLSPYKFSRRALGSDDVSLNITHCGVCYADVVWTRNKFGDSKYPVVPGHEIAGIVKEVGSNVRRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARGSVFTFNGVDVDGTVTKGGYSSHIVVHERYCFKIPDNYPLASAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHLAVKFGKAFGLRVTVLSTSISKKEEALNLLGADKFVVSSDEQQMMALSRSLDFIIDTASGDHPFDPYLSLLKTAGVLVLVGFPSEVKFSPGSIVMGMRTVSGSATGGTKDTQEMLDFCAAHGIHPEIEVIPIQYANEALERLIKKDVKYRFVIDIENSLK* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0327 355 SUPERFAMILY GroES-like 14 183 IPR011032 -
Vvi2g0327 355 PANTHER ALDEHYDE REDUCTASE 9 353 IPR047109 GO:0016616
Vvi2g0327 355 CDD CAD1 12 349 IPR047109 GO:0016616
Vvi2g0327 355 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Vvi2g0327 355 FunFam Uncharacterized protein 13 164 - -
Vvi2g0327 355 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Vvi2g0327 355 Pfam Zinc-binding dehydrogenase 192 314 IPR013149 -
Vvi2g0327 355 Pfam Alcohol dehydrogenase GroES-like domain 35 150 IPR013154 -
Vvi2g0327 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Vvi2g0327 355 Gene3D - 13 350 - -
Vvi2g0327 355 Gene3D - 165 320 - -
Vvi2g0327 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Vvi2g0327 355 FunFam Cinnamyl alcohol dehydrogenase 165 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0327 Vvi-Chr2 2634798 2636564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0327 2 355 Monolignol Biosynthesis Gene Families AT1G72680 77.401 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0327 K00083 - vvi:100244482 703.36